Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00525 ATGGAGATTGAAGCCGACGCAAGAGATAGTTCTCTTGTTCTGCTCAAGCAAGGAGCTGAAGCTAGGGTTTTTGAGTCTTCTTTTGTGGGAAGGAAATCCGTTGTCAAGGAACGCTTCTCAAAGAAGTACAGGCATCCAACTTTGGATTCAAAATTGACCCTCAAGCGCTTAAATGCGGAGGCAAGGTGCATGACCAAAGCAAGGCGACTTGGGGTTTGTACTCCTGTGCTGTATGCTGTGGATCCTGCTTTGCACACGTTAACATTTGAATATGTTGAGGGCCCTTCTGTCAAAGATGTGTTTCTTGAATTCAGGTCACATGTTGTCAATAAAGAGTGGCTGGATGATATTGCATCCCAAATTGGTGATGCAATTGGAAAGCTACATGATGGTGGTCTTATTCATGGTGATTTAACAACATCAAATATGTTACTGAAGAGTGATACAAAGCAGTTGgttcttatcgattttggtttgagcttcacttcaactctaccagaagataaggctgttgatttgtatgttctggaaagagctcttatttcaatgcattcgtcatgtgggaatgtgatggaTCAGATACTTGCTGCATACAGGAAGTCATCAAAGCAGTGGTCATCCACATTGAACAAACTTGCACAAGTGCGACAAAGAGGACGGAAGAGGACCATGGTTGGATGA 681 0.3598 MEIEADARDSSLVLLKQGAEARVFESSFVGRKSVVKERFSKKYRHPTLDSKLTLKRLNAEARCMTKARRLGVCTPVLYAVDPALHTLTFEYVEGPSVKDVFLEFRSHVVNKEWLDDIASQIGDAIGKLHDGGLIHGDLTTSNMLLKSDTKQLVLIDFGLSFTSTLPEDKAVDLYVLERALISMHSSCGNVMDQILAAYRKSSKQWSSTLNKLAQVRQRGRKRTMVG 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00525 226 CDD PKc 17 160 - -
Gma18g00525 226 SUPERFAMILY Protein kinase-like (PK-like) 14 174 IPR011009 -
Gma18g00525 226 Pfam Protein kinase domain 39 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00525 226 Gene3D Phosphorylase Kinase; domain 1 20 92 - -
Gma18g00525 226 Gene3D Transferase(Phosphotransferase) domain 1 105 223 - -
Gma18g00525 226 ProSitePatterns Tyrosine protein kinases specific active-site signature. 133 145 IPR008266 GO:0004672|GO:0006468
Gma18g00525 226 TIGRFAM arch_bud32: Kae1-associated kinase Bud32 15 220 IPR022495 GO:0004674
Gma18g00525 226 SMART serkin_6 9 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00525 226 PANTHER EKC/KEOPS COMPLEX SUBUNIT BUD32-LIKE ISOFORM X1 1 226 - -
Gma18g00525 226 ProSiteProfiles Protein kinase domain profile. 9 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00525 226 PANTHER O-SIALOGLYCOPROTEIN ENDOPEPTIDASE 1 226 IPR022495 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00525 Gma-Chr18 4959192 4962856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00525 2 160 MAP Kinase Kinase Kinase AT5G66710 28.221 1.18e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Gma18g00525 Pkinase 4.8e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00525 K08851 - gmx:100782376 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00525 18 4959192 4962856 Gma11g01821 11 20969866 20976387 GST