Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00523 ATGCCTTCTACTACTCTTCAATGGCTAAGCCTTGTTGGCATCATTTGGCTCCAAGCCATAATTGGCACAAACACTAATTTCCCTACTTACTCTTCTCAACTGAAGCAACTTCTATCTATTTCCCAAGTTCAACTCAATAACCTTGCTTTTGCCTCTGATGCAGGCAAGCTTTTTGGCTGGTTTTCTGGCCTTGCTTCTATATACCTCCCCCTTTGGTTAGTCCTCTTGATTGGTTCAACTCTTGGGTTAGTTGGTTATGGTGTGCAATATCTCTACATAACCAACCAAATCTCCTCTTTGTCCTATTGGCATGTGTTCTTGCTAACTTTTCTTGCTGGCAATAGCATTTGTTGGATAAACACAGTGTGCTATGTTGTCACCATAAGGAACTTCTTTTCTGATCGCGAAGTTGCCGTGGGAATGACAACTAGCTACCAAGGACTAAGTGCAAAGATTTATGCCAACATTGTTGATGCTGTTTCTCCTCACAAGAAGGCTAGTGCCTTTATCTTCCTTAACTCTCTCTTACCTGTGATAGTTGGTTTAATAGCAGCTCCTCTAGTCAGAGAAATTGATGAAGAAGTCACAAGTCCTAAGCACACGCGTGTTGGTTTTGGTGTGATGTTTGTTATTACCATTTCAACTGGAATATATGCTGTGTTGAGCAGCTTGCAGTTTGTCACAAGCAAAGTATCCTCACTAGGCACCTTGGTTGGTATTCTAGTGACCCTTCTCTTGCCTCTACTAGTCCCTCTTTCAGTGAAGATCAAGGAGCTTCAGGAAAACACAGAAAAAGTGAGAATCTACCATTTTACTATGGAGGAGAATACTACTAGTGAAGAGAGGGTGGAGAATGAGGTGAAAGAGGGTGAAGTTCAAGAAGAGGTTGGTATTATAGAAGAAGTTGGAGTGAAGTTGATGCTGAGAAGAATAAATTTCTGGTTATATTTCTTTGTCTATTTTTTTGGTGCAACAGTTGGTTTAGTATATCTTAATAACTTGGGACAAATAGCTGAATCCAGGGGTTGCTCTAATATTTCATCTTTGGTGTCTTTGTCATCATCGTTTGGGTTCTTTGGCCGTCTCATGCCATCTCTTATGTACTACTTCTACAGGGGAAAATGTAGAATTTCAAGACCTGCTTCTATGTTGGCAGCGATGGTTCCAATGTCAGGTGCATTTTTCTTACTTCTCAACAAAACAGACATTGTCCTCTACACCAGCACTGCAGTGATTGGAGTGTGTACTGGAGCAATCACTTCCATTGCTGTTTCCACAACTACTGAGCTATTTGGTACTAATCATTTCTCAGTGAATCATAATGTGGTGGTGGCCAACATTCCTATTGGATCCCTTATATTTGGCTACTCAGCTGCACTTATTTACCGTAAGGAAGGGCATGAACATGATGAGCATGTGAAATGCATGGGCATGGAATGCTACAGAAACACTTTTATCATGTGGGGTTCCTTTTGTTTCCTTGGAACTCTTTTGGCTTTGATTCTACATGCTAGGACTCGCAAGTTTTTCTCACAAAAACAATAG 1545 0.4091 MPSTTLQWLSLVGIIWLQAIIGTNTNFPTYSSQLKQLLSISQVQLNNLAFASDAGKLFGWFSGLASIYLPLWLVLLIGSTLGLVGYGVQYLYITNQISSLSYWHVFLLTFLAGNSICWINTVCYVVTIRNFFSDREVAVGMTTSYQGLSAKIYANIVDAVSPHKKASAFIFLNSLLPVIVGLIAAPLVREIDEEVTSPKHTRVGFGVMFVITISTGIYAVLSSLQFVTSKVSSLGTLVGILVTLLLPLLVPLSVKIKELQENTEKVRIYHFTMEENTTSEERVENEVKEGEVQEEVGIIEEVGVKLMLRRINFWLYFFVYFFGATVGLVYLNNLGQIAESRGCSNISSLVSLSSSFGFFGRLMPSLMYYFYRGKCRISRPASMLAAMVPMSGAFFLLLNKTDIVLYTSTAVIGVCTGAITSIAVSTTTELFGTNHFSVNHNVVVANIPIGSLIFGYSAALIYRKEGHEHDEHVKCMGMECYRNTFIMWGSFCFLGTLLALILHARTRKFFSQKQ 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00523 514 CDD MFS_Mch1p_like 6 496 - -
Gma18g00523 514 Gene3D MFS general substrate transporter like domains 156 506 IPR036259 -
Gma18g00523 514 Pfam Nodulin-like 7 251 IPR010658 -
Gma18g00523 514 SUPERFAMILY MFS general substrate transporter 8 508 IPR036259 -
Gma18g00523 514 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 513 - -
Gma18g00523 514 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 3 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00523 Gma-Chr18 4944226 4946381 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00523 1 513 Nodulin-like Gene Family AT2G30300 48.467 8.87e-153 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00523 - - gmx:100800763 932.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00523 18 4944226 4946381 Gma18g00523 18 4944226 4946381 ECH
Gma18g00523 18 4944226 4946381 Gma11g01818 11 20920024 20921882 GST
Gma18g00523 18 4944226 4946381 Gma14g01980 14 50719552 50721724 PCT
Gma18g00523 18 4944226 4946381 Gma02g02200 02 47975366 47977327 PCT
Gma14g01980 14 50719552 50721724 Gma18g00523 18 4944226 4946381 PCT
Gma02g02200 02 47975366 47977327 Gma18g00523 18 4944226 4946381 PCT