Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00520 ATGGCTTTCCATTCACTACGTTATAACGTATTTTGCTTCTCTATTTTGTTTTCTCTACTTATTGCCTTAGCCTCTGCTGAGCTATCTTCAGATTTCTATGCATCAACATGCCCCAATGCCCTCTCTACCATAAAATCTGCAGTGAAAAGTGCAGTTGCTAAAGAGCATCGCATGGGAGCATCCTTGCTCCGTCTTCATTTCCATGATTGCTTTGTTAATGGATGTGATGCATCAGTTCTTCTAGATGACACTTCGAGCTTCACGGGAGAAAAGTCAGCTGCTGCAAATTTGAATTCTTTGAGGGGTTTTGATGTAATTGACGACATCAAAAGTCAGTTGGAGAGTGCTTGTCCAGGAATTGTTTCCTGTGCAGATATTGTTGCTGTTGCTGCACGAGATTCTGTCGTAGCATTGGGTGGTCCATCATGGACAATAGGGTTAGGGAGAAGAGATTCAACCACTGCAAGTAAAGATGCTGCCACTAGTGATATCCCATCCCCTCTAATGGATCTCAATGATCTCATATCTGCCTTTTCAAACAAGGGGTTTACCTCCCAAGAGATGGTAGTCCTCTCAGgagctcatacaacagggcaagccaaatgccaATTCTTCCGGGGTAGGATTTACAATGAGACCAACATTGATTCAGATTTTGCAACATCAGCCAAGTCAAATTGTCCAAGCACTGATGGTGACAGCAACCTCTCCCCACTTGATGTCACCACCAATGTGTTATTTGACAATGCTTATTTCAAGAACCTTGTGAACAAGAAAGGGCTTCTACATTCTGATCAGCAACTTTTCAGTGGCGGTTCTACTGATTCTCAGGTCACTACCTACAGCACTAGCTCTTCAACTTTCTATGCAGACTTTGCCAGTGCTATGGTCAAAATGGGAAACCTCAGCCCTTTAACAGGAAGCAGTGGCCAAATTCGTACTAACTGCCGCAACGTTAACTAA 963 0.4185 MAFHSLRYNVFCFSILFSLLIALASAELSSDFYASTCPNALSTIKSAVKSAVAKEHRMGASLLRLHFHDCFVNGCDASVLLDDTSSFTGEKSAAANLNSLRGFDVIDDIKSQLESACPGIVSCADIVAVAARDSVVALGGPSWTIGLGRRDSTTASKDAATSDIPSPLMDLNDLISAFSNKGFTSQEMVVLSGAHTTGQAKCQFFRGRIYNETNIDSDFATSAKSNCPSTDGDSNLSPLDVTTNVLFDNAYFKNLVNKKGLLHSDQQLFSGGSTDSQVTTYSTSSSTFYADFASAMVKMGNLSPLTGSSGQIRTNCRNVN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00520 320 ProSiteProfiles Plant heme peroxidase family profile. 27 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g00520 320 Gene3D - 31 317 - -
Gma18g00520 320 PANTHER PEROXIDASE 72-RELATED 20 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00520 320 Gene3D Peroxidase, domain 2 165 299 - -
Gma18g00520 320 CDD secretory_peroxidase 27 317 IPR033905 GO:0004601|GO:0042744
Gma18g00520 320 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g00520 320 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g00520 320 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g00520 320 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g00520 320 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g00520 320 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Gma18g00520 320 Pfam Peroxidase 45 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g00520 320 SUPERFAMILY Heme-dependent peroxidases 28 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma18g00520 320 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00520 320 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00520 320 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00520 320 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00520 320 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00520 320 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00520 320 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00520 320 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00520 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00520 320 PANTHER PEROXIDASE 20 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00520 Gma-Chr18 4893351 4895981 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00520 23 320 Peroxidase AT5G05340 63.333 8.98e-142 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00520 K00430 - gmx:100818176 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00520 18 4893351 4895981 Gma18g00520 18 4893351 4895981 ECH
Gma18g00520 18 4893351 4895981 Gma02g02442 02 50572463 50574689 ECH
Gma18g00520 18 4893351 4895981 Gma14g00450 14 4315327 4317837 ECH
Gma18g00520 18 4893351 4895981 Gma11g01813 11 20775789 20785905 GST