Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00519 ATGGCTTCTCATCATCTCCAATATCTTGTGCTTGCCATAGCCACACTTCTCACAATCTCTTCACATGCACAACTCACTCCTGATTTTTACAACAATGTTTGCCCTCAGGCACTGCCTATCATTAAGTCAGTTGTTCAACGAGCAATATTTCGTGAACGGCGCATTGGAGCATCTTTACTTCGTTTGCACTTCCATGACTGTTTTGTCAATGGCTGTGATGGATCAATTCTGCTGGATGACACCCCCAACTTCACTGGGGAGAAGACTGCCCTTCCAAATATTAACTCAATAAGAGGTTTGGAGGTGGTTGATGAAATTAAAGCAGCCGTTGACAGAGCTTGCAAACGTCCCGTGGTATCATGTGCAGATATCTTAGCTGTAGCCGCTCGTGATTCTGTGTCCATATTGGGAGGCTCACTCTACTGGTACAAAGTGTTACTAGGCAGAAGGGATTCAAGAACTGCTAGCAAAGATGCTGCAAACTCAAATCTTCCACCCCCATTTTTCAGCCTCTCTCAGCTACTTTCAAGTTTTCAGTCTCACGGCTTAGACCTCAAAGATCTCGTGGCTCTCTCTGGTGCACACACCATTGGATTCGCGCAATGCGCCACCTTTAGGAACAGGATCTACAATGACACCAACATAGACCCCAACTTTGCATCTTCTCTTCAGGGTACGTGCCCTAGAAGTGGTGGAGACAGCAATCTAGCTCCGTTGGATCGTTTCTCTCCCTCAAGAGTTGACACTTCGTACTATACCTCTTTGCTGAGTAAAAAGGGTCTCCTTCATTCTGATCAAGAGCTCTTCAAAGGAGATGGTGGTGAGAGTGACACTTTGGTGAAGCTCTACAGCAGGAACCCTTTTGCTTTTGCTAGAGATTTTAAGGCTTCCATGATCAAGATGGGTAACATGAAGCCTCTTATTGGGAATGCTGGAGAGATCAGAGTCAATTGTAGAAGTGTCAACTAA 969 0.4541 MASHHLQYLVLAIATLLTISSHAQLTPDFYNNVCPQALPIIKSVVQRAIFRERRIGASLLRLHFHDCFVNGCDGSILLDDTPNFTGEKTALPNINSIRGLEVVDEIKAAVDRACKRPVVSCADILAVAARDSVSILGGSLYWYKVLLGRRDSRTASKDAANSNLPPPFFSLSQLLSSFQSHGLDLKDLVALSGAHTIGFAQCATFRNRIYNDTNIDPNFASSLQGTCPRSGGDSNLAPLDRFSPSRVDTSYYTSLLSKKGLLHSDQELFKGDGGESDTLVKLYSRNPFAFARDFKASMIKMGNMKPLIGNAGEIRVNCRSVN 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00519 322 PANTHER CATIONIC PEROXIDASE 6 321 - -
Gma18g00519 322 Gene3D - 28 319 - -
Gma18g00519 322 Pfam Peroxidase 42 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g00519 322 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00519 322 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00519 322 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00519 322 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00519 322 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00519 322 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00519 322 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00519 322 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00519 322 SUPERFAMILY Heme-dependent peroxidases 24 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma18g00519 322 CDD secretory_peroxidase 24 321 IPR033905 GO:0004601|GO:0042744
Gma18g00519 322 PANTHER PEROXIDASE 72-RELATED 6 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00519 322 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Gma18g00519 322 Gene3D Peroxidase, domain 2 165 301 - -
Gma18g00519 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Gma18g00519 322 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g00519 322 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g00519 322 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g00519 322 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g00519 322 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g00519 322 ProSiteProfiles Plant heme peroxidase family profile. 24 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00519 Gma-Chr18 4883538 4886313 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00519 22 322 Peroxidase AT5G05340 57.756 1.37e-121 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00519 K00430 - gmx:100816580 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00519 18 4883538 4886313 Gma18g00519 18 4883538 4886313 ECH
Gma18g00519 18 4883538 4886313 Gma02g02205 02 48033307 48036382 PCT
Gma02g02205 02 48033307 48036382 Gma18g00519 18 4883538 4886313 PCT