Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00518 ATGGCTTCTAATATTCAAACTCTGCTTGTGCTTGTTCTGGCAACATTGGGAACATTTATGATCCCTTCCAATGCACAGCTTACTCCTAATTTCTATAAGAAAGTTTGTCCCCAGGCATTGCCAATCATAAGGTCTGTCGTTCACCGAGCAATTATTCGTGAACGACGCATTGGAGCCTCCTTGCTGCGTTTGCATTTCCATGACTGCTTTGTTAATGGTTGTGATGGATCAGTTCTACTGGATGACACGCACAACTTCACTGGCGAGAAAACAGCCCTACCTAATCTGAATTCAATAAGAGGTTTGGAAGTGGTTGATGAGATTAAGGCAGCGGTTGACAAAGCTTGCAACCGTCCTGCTGTATCATGTGCAGATATCTTAGCTATAGCTGCTCGTGATTCTGTGGCCATATTAGGGGGTCCACACCTATGGTACGGCGTATTACTAGGCAGAAGAGACGCGAGAACTGCAAGCAAGGATGCTGCAAACGCCAATCTCCCTCCTCCATTTTTCAACTTCTCACAGCTTCTCTCCAACTTCAACTCTCACGGATTAGACCTCAAAGATCTTGTGGCACTCTCTGGTGGCCACACCATAGGGTTTGCAAGGTGCACTACCTTCAGGGACCGCATCTACAACGACACCATGGCCAACATAAACCCTACTTTTGCAGCCTCTTTGAGGAAAACATGCCCTAGAGTTGGCGGTGACAACAACTTGGCACCGTTGGATCCAACTCCTGCAACGGTTGACACTTCATACTTCAAGGAATTGCTGTGCAAAAAGGGTCTCCTTCATTCGGATCAAGAACTCTACAAGGGAAATGGCAGTGAAAGTGACAAGTTGGTGGAGCTTTATAGCAGGAACCCTTTTGCATTTGCTAGAGATTTCAAGGCTTCTATGATCAAGATGGGTAACATGAAGCCTCTCACAGGGAACAAAGGAGAGATCAGACGCAACTGCAGAAGAGTTAATTAA 978 0.4601 MASNIQTLLVLVLATLGTFMIPSNAQLTPNFYKKVCPQALPIIRSVVHRAIIRERRIGASLLRLHFHDCFVNGCDGSVLLDDTHNFTGEKTALPNLNSIRGLEVVDEIKAAVDKACNRPAVSCADILAIAARDSVAILGGPHLWYGVLLGRRDARTASKDAANANLPPPFFNFSQLLSNFNSHGLDLKDLVALSGGHTIGFARCTTFRDRIYNDTMANINPTFAASLRKTCPRVGGDNNLAPLDPTPATVDTSYFKELLCKKGLLHSDQELYKGNGSESDKLVELYSRNPFAFARDFKASMIKMGNMKPLTGNKGEIRRNCRRVN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00518 325 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Gma18g00518 325 CDD secretory_peroxidase 26 324 IPR033905 GO:0004601|GO:0042744
Gma18g00518 325 Pfam Peroxidase 44 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g00518 325 PANTHER PEROXIDASE 72-RELATED 5 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00518 325 Gene3D Peroxidase, domain 2 167 304 - -
Gma18g00518 325 ProSiteProfiles Plant heme peroxidase family profile. 26 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g00518 325 PANTHER CATIONIC PEROXIDASE 5 324 - -
Gma18g00518 325 SUPERFAMILY Heme-dependent peroxidases 26 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma18g00518 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Gma18g00518 325 Gene3D - 30 325 - -
Gma18g00518 325 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00518 325 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00518 325 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00518 325 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00518 325 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00518 325 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00518 325 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00518 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00518 325 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g00518 325 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g00518 325 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g00518 325 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g00518 325 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00518 Gma-Chr18 4876283 4880355 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00518 25 325 Peroxidase AT5G05340 58.882 3.08e-123 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00518 K00430 - gmx:100816056 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00518 18 4876283 4880355 Gma11g01810 11 20722503 20726512 GST
Gma18g00518 18 4876283 4880355 Gma14g01984 14 50783563 50787639 PCT
Gma14g01984 14 50783563 50787639 Gma18g00518 18 4876283 4880355 PCT