Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00517 ATGGCACTTTCTCCTATTCGTTCTTCTTCTTTCTCTTCATCAGCTATTGTTGCATTGGCTGTGTTACTGCTTCTTACAGGGACCTCTTCAGCTAACCTCTCAAAGAACTTCTATTCCAAGAcatgtcccaacgttttcaacactgtaaaatctgtagttaaatctgctgttgtcagagaacctcgcattggggcatctattgttcgtctcttcttccatgactgctttgttcaaggctgtgatgggtcaatactacttgatgacactccaaccttccagggggagaaaactgcagctgctaacaacaattcagtgagaggctttgaagtaattgatgctatcaagtctgaggtcgagaaaatatgccctggtgtggtctcatgtgctgatatcttggacattgcttctcgtgactctgttgttcttCTTGGAGGGCCATTTTGGAAAGTTAGACTTGGAAGAAGGGATTCCAGAACTGCCAACTTTACTGCTGCTAACACTGGTGTTATTCCACCTCCCACATCTAACCTCACCAACCTTATCACAAGGTTTCGAGATCAAGGACTCTCTGCTAGGGACATGGTTGCTTTATCTGGAGCTCACACATTTGGCAAAGCAAGGTGTACTAGTTTCAGAGATCGCATATACAATCAAACCAACATTGATAGAACATTTGCATTGGCCAGGCAGAGGAGGTGTCCTAGGACTAATGGCACAGGTGACAACAATCTAGCAAATCTAGACTTCAGAACTCCAAATCATTTTGACAACAACTACTTCAAAAACCTTCTCAtcaaaaggggactcctgaattctgatcaagtgcttttcaatggtggatccactgattcactggtaagaacttacagccagaataacaaggcatttgatactgactttgttaaagcaatgattaggatgggagatatcaaacccttaactgggtcacaaggtgagattaggaagaactgcaggagagtgaattaa 987 0.2118 MALSPIRSSSFSSSAIVALAVLLLLTGTSSANLSKNFYSKTCPNVFNTVKSVVKSAVVREPRIGASIVRLFFHDCFVQGCDGSILLDDTPTFQGEKTAAANNNSVRGFEVIDAIKSEVEKICPGVVSCADILDIASRDSVVLLGGPFWKVRLGRRDSRTANFTAANTGVIPPPTSNLTNLITRFRDQGLSARDMVALSGAHTFGKARCTSFRDRIYNQTNIDRTFALARQRRCPRTNGTGDNNLANLDFRTPNHFDNNYFKNLLIKRGLLNSDQVLFNGGSTDSLVRTYSQNNKAFDTDFVKAMIRMGDIKPLTGSQGEIRKNCRRVN 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00517 328 PANTHER PEROXIDASE 72-RELATED 13 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00517 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
Gma18g00517 328 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g00517 328 PRINTS Haem peroxidase superfamily signature 126 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g00517 328 PRINTS Haem peroxidase superfamily signature 144 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g00517 328 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g00517 328 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g00517 328 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00517 328 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00517 328 PRINTS Plant peroxidase signature 106 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00517 328 PRINTS Plant peroxidase signature 125 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00517 328 PRINTS Plant peroxidase signature 144 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00517 328 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00517 328 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00517 328 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00517 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma18g00517 328 Pfam Peroxidase 49 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g00517 328 SUPERFAMILY Heme-dependent peroxidases 32 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma18g00517 328 ProSiteProfiles Plant heme peroxidase family profile. 32 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g00517 328 PANTHER PEROXIDASE 13 327 - -
Gma18g00517 328 CDD secretory_peroxidase 32 327 IPR033905 GO:0004601|GO:0042744
Gma18g00517 328 ProSitePatterns Peroxidases active site signature. 64 75 IPR019794 GO:0004601
Gma18g00517 328 Gene3D Peroxidase, domain 2 171 307 - -
Gma18g00517 328 Gene3D - 36 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00517 Gma-Chr18 4856109 4860637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00517 16 328 Peroxidase AT5G58390 65.176 1.85e-152 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00517 K00430 - gmx:100813384 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00517 18 4856109 4860637 Gma18g00517 18 4856109 4860637 ECH
Gma18g01952 18 52757201 52759718 Gma18g00517 18 4856109 4860637 ECH
Gma18g00517 18 4856109 4860637 Gma11g01806 11 20633497 20638441 GST
Gma18g00517 18 4856109 4860637 Gma14g01986 14 50800693 50805532 PCT
Gma18g00517 18 4856109 4860637 Gma02g02208 02 48068729 48073190 PCT
Gma14g01986 14 50800693 50805532 Gma18g00517 18 4856109 4860637 PCT
Gma02g02208 02 48068729 48073190 Gma18g00517 18 4856109 4860637 PCT