Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00510 ATGCCGGAGATCGACCAGGCGGCGGCGGCGGCGGAGGAAACCGCCCTGTTCGGAAAATACGAGCTGGGCCGCGTCCTCGGCTGCGGTGCCTTCGCCAAAGTCCACTACGCGCGCAACGTGCAAACGGGGCAGAGCGTGGCCGTGAAAATCATCAACAAGAAGAAACTCGCCGGAACCGGCCTCGTCGGAAACGTGAAGCGCGAAATCACGATCATGAGCAAGCTCCACCACCCCTACATAGTGCGCCTCCACGAAGTCCTCGCCACCAAGACCAAAATCTTCTTCATCATGGACTTCGTCCGCGGCGGCGAGTTATTCGCGAAAATCTCCAAGGGTCGCTTCGCCGAGGATCTCAGCCGCAAATACTTTCATCAATTGATCTCCGCCGTCGGGTACTGCCACTCGCGCGGCGTTTTCCACCGCGACCTCAAGCCGGAGAATCTCCTCCTCGACGAGAACGGCGATTTGAGGGTCTCGGATTTCGGGTTGAGTGCGGTTCGAGATCAGATCCGGCCCGATGGGCTGCTCCACACGCTTTGCGGAACCCCTGCTTACGTGGCACCTGAGATTTTAGGCAAAAAAGGTTACGATGGTGCCAAGGTTGATGTGTGGTCATGCGGCGTCGTTCTGTTCGTGCTCGCCGCGGGATACTTACCGTTCAACGACCCGAATTTGATGGTAATGTATAAGAAAATTTACAAAGGCGAGTTCCGGTGTCCGCGGTGGATGTCGCCGGAGCTCCGGCGATTCTTATCGAAGTTGCTCGACACGAACCCAGAAACGAGGATCACGGTTGATGGCATGACGCGGGACCCGTGGTTCAAAAAAGGGTACAAAGAATTAAAATTTCACGAAGAGGATTACCATGCAACCGGGTCGGGTTCGTTTTTCGGGCCGAAGGACGAGAGGGTGGTGGATTTGAACGCTTTTGATTTGATATGTTTTTCTTCGGGGTTGGATTTGTCGGGGATGTTTGGCGGGGAGTGGGGGGAGAGGTTGGTGACGCGGGAGCCGCCGGAGAGGGTTTTGGAGGCGGCGGAGGATGCGGGGGCGGCGGCGGGGATGGCGGTGCGGTGGAAGAAGGAGTGTGGGGTGGAGTTGGAAGGGATGAATGGGAGGTTTGGGATTGGGGTGGAGGTTTACCGGCTCACGGCGGAGCTCGCGGTGGTGGAGGTAAGGAAGAGGGGCGGCGACGCCGTGGCCGCGGCAGTGAGGGGTGTGTGGGAGGAGAGGTTGAAGCCTTTGTTGCTTGGGGGTGCAACCACGTCGTATAGTAGTGAGGAGGAACAACAACAACAACATCAAGAAGAAGAAGAACAACAAGAACTTGAGTCGCAGGTTGCCGGTGACTGA 1353 0.5743 MPEIDQAAAAAEETALFGKYELGRVLGCGAFAKVHYARNVQTGQSVAVKIINKKKLAGTGLVGNVKREITIMSKLHHPYIVRLHEVLATKTKIFFIMDFVRGGELFAKISKGRFAEDLSRKYFHQLISAVGYCHSRGVFHRDLKPENLLLDENGDLRVSDFGLSAVRDQIRPDGLLHTLCGTPAYVAPEILGKKGYDGAKVDVWSCGVVLFVLAAGYLPFNDPNLMVMYKKIYKGEFRCPRWMSPELRRFLSKLLDTNPETRITVDGMTRDPWFKKGYKELKFHEEDYHATGSGSFFGPKDERVVDLNAFDLICFSSGLDLSGMFGGEWGERLVTREPPERVLEAAEDAGAAAGMAVRWKKECGVELEGMNGRFGIGVEVYRLTAELAVVEVRKRGGDAVAAAVRGVWEERLKPLLLGGATTSYSSEEEQQQQHQEEEEQQELESQVAGD 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00510 450 SUPERFAMILY Protein kinase-like (PK-like) 17 283 IPR011009 -
Gma18g00510 450 Pfam NAF domain 307 358 IPR004041 GO:0007165
Gma18g00510 450 CDD CIPK_C 308 416 - -
Gma18g00510 450 PANTHER - 1 443 - -
Gma18g00510 450 Gene3D Kinase associated domain 1, KA1 303 418 - -
Gma18g00510 450 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Gma18g00510 450 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 443 - -
Gma18g00510 450 Pfam Protein kinase domain 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00510 450 Coils Coil 424 446 - -
Gma18g00510 450 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00510 450 ProSiteProfiles NAF domain profile. 302 326 IPR018451 GO:0007165
Gma18g00510 450 Gene3D Transferase(Phosphotransferase) domain 1 10 296 - -
Gma18g00510 450 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00510 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Gma18g00510 450 MobiDBLite consensus disorder prediction 419 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00510 Gma-Chr18 4798179 4800696 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00510 1 417 CBL-interacting serine-threonine protein kinases AT2G30360 62.617 0.0 534
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gma18g00510 Pkinase 7.2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00510 - K12761 gmx:100799169 857.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00510 18 4798179 4800696 Gma18g00510 18 4798179 4800696 ECH
Gma18g00510 18 4798179 4800696 Gma11g01799 11 20530612 20533246 GST
Gma18g00510 18 4798179 4800696 Gma14g01995 14 50860473 50862481 PCT
Gma18g00510 18 4798179 4800696 Gma02g02217 02 48157418 48159330 PCT
Gma14g01995 14 50860473 50862481 Gma18g00510 18 4798179 4800696 PCT
Gma02g02217 02 48157418 48159330 Gma18g00510 18 4798179 4800696 PCT