Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00507 ATGGGTAATAACAGGTTCAGATTGTCAGATATGATGCCAAATGCATGGTTCTATAAGCTCAAAGATATGAGCAAATCAAGGAAGAGAAATGGCCCTCATGTTATGAAGAACAAAGTAGCCTCACCAACAACATCACAAAGGTCACAGCCAAGATACTCTCATTATTTCTCCATTGAACCAAACATAGCTGGTAAGTTATACAACTCTCCTATTTTTTACACCAAACACTCAGATAACACATTCACTGATTCACCAAGAAGGTCATCCAAGAGAAGGGCTGGGAGAAAAACCATTTATAAGCCTTCTCCAACAGTTGTGTCTTCACCCGTCATCGAAAGTTTTGGTTGTCATTCCACAAACAATTGGATTAAGCCAAATCAACTTCAGTCTCCAGACTATTATCTCTCCTCCATAGAGATTTCTTCTTCTGAATCAAACCTCAATGATGAATATGTTTCATCTGAGTCTGAGTGTGATAAGTTCACTATTCCTGACCTGCTTAATGGGGTAGCCTCTGAATGCAGTTGTAGAGTTAGCTCTTCCACCAATGACATCATCATTGACATGAAAAATGAACCCTTCAATGGAAATTCTGAAAACCTTGATGGCTTTGACACAATTTCACAATTGGGCCTTGCTCCAATATTAACAAAGCCAGTGAAGTTTGATGATAAGGTCATTGAAACCACTGAGTTGAGAAGATCAGCTAAATTTGATGAGCTGAAGTCTCATCAGTCTCTATCTGTCATAGTTAGCAAAGAGGAATGTAGTAGAACTAAGAGAGAAAGAAAAACAAGTCCAGTAGCTAGAGTTTCCTCTGCTAATTCTCCAGGTATAAAACTTAGAGTCAATTCTCCAAAACTCGCAAGCAAGAAAGTTCAAGCCTATGCAAGGAGGAGTGTGTCATCCAGAGCATGCAAGGCCTCAATGAATTCAGGCTTTCCAGAGGGATTTGCAGTTGTTAAGTCCTCACTTGATCCACAAAGAGACTTCAGGGAGTCAATGGTGGAGATGATTGTGGAGAACAATATCCACGCATCGAAAGATTTGGAGAACTTGCTTGCCTGCTATCTCTCACTGAATTCAAGGGAATACCATGATCTTATTGTCAAAGCATTTGAGCAAATTTGGTATGACATGGCTCAACTCAGAATGTAA 1158 0.3972 MGNNRFRLSDMMPNAWFYKLKDMSKSRKRNGPHVMKNKVASPTTSQRSQPRYSHYFSIEPNIAGKLYNSPIFYTKHSDNTFTDSPRRSSKRRAGRKTIYKPSPTVVSSPVIESFGCHSTNNWIKPNQLQSPDYYLSSIEISSSESNLNDEYVSSESECDKFTIPDLLNGVASECSCRVSSSTNDIIIDMKNEPFNGNSENLDGFDTISQLGLAPILTKPVKFDDKVIETTELRRSAKFDELKSHQSLSVIVSKEECSRTKRERKTSPVARVSSANSPGIKLRVNSPKLASKKVQAYARRSVSSRACKASMNSGFPEGFAVVKSSLDPQRDFRESMVEMIVENNIHASKDLENLLACYLSLNSREYHDLIVKAFEQIWYDMAQLRM 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00507 385 Pfam DNA-binding domain 1 47 IPR025830 GO:0003677
Gma18g00507 385 ProSiteProfiles OVATE domain profile. 320 379 IPR006458 -
Gma18g00507 385 MobiDBLite consensus disorder prediction 27 52 - -
Gma18g00507 385 MobiDBLite consensus disorder prediction 37 52 - -
Gma18g00507 385 PANTHER TRANSCRIPTION REPRESSOR OFP1-LIKE 3 384 - -
Gma18g00507 385 MobiDBLite consensus disorder prediction 78 101 - -
Gma18g00507 385 Pfam Transcriptional repressor, ovate 324 380 IPR006458 -
Gma18g00507 385 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 384 IPR038933 GO:0045892
Gma18g00507 385 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 318 380 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00507 Gma-Chr18 4757701 4759001 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gma18g00507 Ovate 7.8e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00507 - - gmx:100798120 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00507 18 4757701 4759001 Gma18g00507 18 4757701 4759001 ECH
Gma18g00507 18 4757701 4759001 Gma14g01999 14 50899434 50900672 PCT
Gma18g00507 18 4757701 4759001 Gma02g02222 02 48204721 48205918 PCT
Gma14g01999 14 50899434 50900672 Gma18g00507 18 4757701 4759001 PCT
Gma02g02222 02 48204721 48205918 Gma18g00507 18 4757701 4759001 PCT