Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00506 ATGTATTCCAATAAAAGGTGTAAGGAGGATGGCAAAGCTGAGCCTCGTTACATCGAAACCGACCCAACTGGTAGATATGCTCGGGTTGGAGATATTCTAGGAAAAGGGGCAATGAAGACAGTGTATAAAGCAATTGATGAGGTACTTGGAATAGAAGTAGCATGGAGCCAGGTCAAACTCAACGAGGCACTTCGCAAACCAGAAGACTTGGAGCGGCTTTATTTAGAGGTTCATCTCCTCAGCACTCTCAAGCACCAATCCATCATGAGATTCTACACGTCTTGGATTGATGTTGACAACAAGACCTTCAATTTCATTACAGAAATGTTTACTTCAGGGACACTGAGAGAATACAGGAAGAAATACAAGCACATAGGCCTACAAGCAATAAAGAGTTGGACTCGCCTAATCTTACAGGGTCTTGTTTATCTACATGAACATGATCCTCCAGTAATTCATAGGGACCTCAAATGTGATAACATTTTTGTCAATGGCCATCTTGGACAAGTGAAAATTGGTGACCTGGGTCTAGCAGCAATTCTCCATGGTTCCCAACCAGCTCACAGTGTTATAGGCACCCCAGAGTTCATGGCACCAGAATTATATGAAGAAGAATACAATGAACTTGTTGATGTGTACTCATTTGGCATGTGTGTTCTGGAAATGCTTACATCTGATTATCCATATAGTGAATGTGCTAACCCTGCACAGATATACAAGAAAGTGACATCGGGGAAGCTACCGGCATCATTTTTCAGGATTGAAGACACAGAAGCACAAAGGTTTATTGGCAAGTGTCTAATAACTGCAGCAAAGAGACCATCAGCTAAAGAATTGTTGAATGATCCATTTCTTTTGTCTGATGATGCATCATCCATGACAAAGATCGGAATTCAGAAACCCTTTTTAAATTACAATGAAATGGAAAAGCTTCAATTGGATGATGTTTCACCTAGGACTGAAATGTCAATAACTGGGAAGCTAAATCCAGAACATGATACTATCTTTCTCAAAGTGCAAATTTCCGACAAGGATGGTTCTTGTAGGAATGTATACTTTCCTTTTGACATATACACAGACACTCCCATTGATGTTGCAATGGAGATGGTGAAGGAATTGGAGATCACAGATTTGAAGCCTTCTGATATTGCAAATATGATTGAAGGAGAGATATCTGTGCTGCTGCCAAATAAGAGGAATAGTAACTGTTCAGTTATCACGATGACGACGACAACGAATCATCATTTCCACTCTGCCTCTTCTCGTTCATCATCCCAAGGATCAATATCAGGCTCAGACAGTAGAGCTGATGACTTATTGAATGGAGATTATTGGCTCCATGGTGATGTACTTGATGATGCCAGTTCAATATGCTCCTCACATGGGACATATTCCAACTCAAACTTTTGTTCAGTGGATGAGCAGGAGGAAAACCATAAGGCTTCTACAAGAAAAGATAAACATCTCATCATAAAGAGTCACATGTGCACAAGATTTTCCCCTAATGAAGACCCCATCACTTTGAACCAGTGCAAAGTTTTGGCAGGACCACAAGCACCTTCTACTAGCAAAAACAAGAGGATGATGGACAATCGTAGACTAACAAGGAACAAGTCATTGATTGATACAAGGAGCCAGCTACTACACAGATCACTGGTTGAGGAGGTGAACAAAAGAAGGCTATTCAACACAGTTGGAGCCGTGGAAAATATTGGATTTGTGACACCTTATGAGGTTACCAACAAAAAGTCACATCCAGCATGCGGTGCTTTTGATGTGAACTCTTCTAGAAGTAGCAAGAGAGAAAACTTTAATAGAGAGAAATTTTTTTAG 1833 0.4053 MYSNKRCKEDGKAEPRYIETDPTGRYARVGDILGKGAMKTVYKAIDEVLGIEVAWSQVKLNEALRKPEDLERLYLEVHLLSTLKHQSIMRFYTSWIDVDNKTFNFITEMFTSGTLREYRKKYKHIGLQAIKSWTRLILQGLVYLHEHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILHGSQPAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCVLEMLTSDYPYSECANPAQIYKKVTSGKLPASFFRIEDTEAQRFIGKCLITAAKRPSAKELLNDPFLLSDDASSMTKIGIQKPFLNYNEMEKLQLDDVSPRTEMSITGKLNPEHDTIFLKVQISDKDGSCRNVYFPFDIYTDTPIDVAMEMVKELEITDLKPSDIANMIEGEISVLLPNKRNSNCSVITMTTTTNHHFHSASSRSSSQGSISGSDSRADDLLNGDYWLHGDVLDDASSICSSHGTYSNSNFCSVDEQEENHKASTRKDKHLIIKSHMCTRFSPNEDPITLNQCKVLAGPQAPSTSKNKRMMDNRRLTRNKSLIDTRSQLLHRSLVEEVNKRRLFNTVGAVENIGFVTPYEVTNKKSHPACGAFDVNSSRSSKRENFNREKFF 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00506 610 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00506 610 SUPERFAMILY Protein kinase-like (PK-like) 28 286 IPR011009 -
Gma18g00506 610 PANTHER WNK KINASE 23 589 - -
Gma18g00506 610 Gene3D Transferase(Phosphotransferase) domain 1 110 293 - -
Gma18g00506 610 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 23 589 - -
Gma18g00506 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Gma18g00506 610 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00506 610 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00506 610 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Gma18g00506 610 MobiDBLite consensus disorder prediction 414 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00506 Gma-Chr18 4742410 4747826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00506 17 582 MAP Kinase Kinase Kinase AT5G58350 59.091 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gma18g00506 Pkinase 2.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00506 K08867 - gmx:100778102 1222.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00506 18 4742410 4747826 Gma18g00506 18 4742410 4747826 ECH
Gma18g00506 18 4742410 4747826 Gma14g02000 14 50901542 50906539 PCT
Gma18g00506 18 4742410 4747826 Gma02g02223 02 48209396 48215026 PCT
Gma14g02000 14 50901542 50906539 Gma18g00506 18 4742410 4747826 PCT
Gma02g02223 02 48209396 48215026 Gma18g00506 18 4742410 4747826 PCT