Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00505 ATGGCACACAAGGAATTTTCCATTGCCCTAGTGACTCTCATTGTTCTCTTTGTCAACACGAACCTCCAAGGTGCCACGGCTGACTATGGTGGTGGTTGGCAGAGTGCTCATGCCACTTTCTATGGTGGGGGTGATGCTTCTGGCACAATGGGTGGAGCATGTGGGTATGGAAATTTGTATAGCCAGGGATATGGAACTGACACTGTGGCTCTAAGCACTGCTTTGTTCAACAATGGCTTAAGCTGTGGATCTTGCTATGAAATGAGATGTGATGATGACCCAAGATGGTGCAAACCTGGCTCTATTACCGTCACTGCTACTAACTTCTGCCCACCAAACCCATCTTTGCCTAACAACAATGGTGGTTGGTGCAACCCTCCTTTGCAACACTTTGATATGGCTGAACCTGCCTTCCTTCAAATTGCTGAATATAGAGCTGGAATTGTGCCTGTGGCCTTCAGGAGGGTTCCTTGTGTGAAAAAGGGAGGAATAAGGTTCACAATCAATGGCCACTCTTACTTCAACCTAGTTTTGATCACCAATGTGGCTGGAGCTGGTGATGTGAATTCAGTGTCCATTAAAGGGTCCAAAACTGGGTGGCAGCCCATGTCAAGAAACTGGGGGCAAAACTGGCAGAGCAACTCATACCTCAATGGACAATCCCTCTCTTTTCAAGTCACCACCAGTGATGGCAGAACTGTGACAAGCTTCAATGTGGCACCAGCCAATTGGCAATTTGGCCAGACCTTCCAAGGAGGCCAATTCTAG 768 0.4779 MAHKEFSIALVTLIVLFVNTNLQGATADYGGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTDTVALSTALFNNGLSCGSCYEMRCDDDPRWCKPGSITVTATNFCPPNPSLPNNNGGWCNPPLQHFDMAEPAFLQIAEYRAGIVPVAFRRVPCVKKGGIRFTINGHSYFNLVLITNVAGAGDVNSVSIKGSKTGWQPMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTVTSFNVAPANWQFGQTFQGGQF 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00505 255 SUPERFAMILY PHL pollen allergen 160 252 IPR036749 -
Gma18g00505 255 Pfam Expansin C-terminal domain 164 241 IPR007117 -
Gma18g00505 255 Gene3D - 18 158 IPR036908 -
Gma18g00505 255 SUPERFAMILY Barwin-like endoglucanases 14 181 IPR036908 -
Gma18g00505 255 PRINTS Expansin/Lol pI family signature 32 47 IPR007118 GO:0005576
Gma18g00505 255 PRINTS Expansin/Lol pI family signature 50 68 IPR007118 GO:0005576
Gma18g00505 255 PRINTS Expansin/Lol pI family signature 72 90 IPR007118 GO:0005576
Gma18g00505 255 PRINTS Expansin/Lol pI family signature 146 162 IPR007118 GO:0005576
Gma18g00505 255 PRINTS Expansin/Lol pI family signature 200 214 IPR007118 GO:0005576
Gma18g00505 255 PRINTS Expansin/Lol pI family signature 238 252 IPR007118 GO:0005576
Gma18g00505 255 SMART dpbb_1 68 153 IPR007112 -
Gma18g00505 255 Gene3D - 163 255 IPR036749 -
Gma18g00505 255 PRINTS Expansin signature 63 77 IPR002963 GO:0009664
Gma18g00505 255 PRINTS Expansin signature 90 101 IPR002963 GO:0009664
Gma18g00505 255 PRINTS Expansin signature 102 112 IPR002963 GO:0009664
Gma18g00505 255 PRINTS Expansin signature 121 138 IPR002963 GO:0009664
Gma18g00505 255 PRINTS Expansin signature 138 151 IPR002963 GO:0009664
Gma18g00505 255 PRINTS Expansin signature 162 174 IPR002963 GO:0009664
Gma18g00505 255 PRINTS Expansin signature 174 195 IPR002963 GO:0009664
Gma18g00505 255 PRINTS Expansin signature 209 230 IPR002963 GO:0009664
Gma18g00505 255 PRINTS Expansin signature 238 254 IPR002963 GO:0009664
Gma18g00505 255 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 173 252 IPR007117 -
Gma18g00505 255 Pfam Lytic transglycolase 68 152 IPR009009 -
Gma18g00505 255 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 51 163 IPR007112 -
Gma18g00505 255 PANTHER EXPANSIN-A15 4 255 IPR002963 GO:0009664
Gma18g00505 255 PANTHER EXPANSIN 4 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00505 Gma-Chr18 4729378 4732145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00505 2 255 Expansin Gene Family AT2G40610 78.039 6.85e-146 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00505 - K20628 gmx:100777044 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00505 18 4729378 4732145 Gma18g00505 18 4729378 4732145 ECH
Gma18g00505 18 4729378 4732145 Gma14g02002 14 50930967 50933566 PCT
Gma18g00505 18 4729378 4732145 Gma02g02225 02 48242625 48245556 PCT
Gma14g02002 14 50930967 50933566 Gma18g00505 18 4729378 4732145 PCT
Gma02g02225 02 48242625 48245556 Gma18g00505 18 4729378 4732145 PCT