Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00493 ATGAACAGCGACATTTCCCGGTGGGTCATGGAGTTCCTCCTCCGCAGTTCCGTCCCCGATTCCCTCATCCAGAAAACCCTAACCGCCCTCCCTCTATCCCCCGCCGAACCCCGCCTCAAGAAAAACCTCCTCCTCCGCACCCTCCAAACCCTCCTCCGTAGAGCCACACTATCGGAAACCGCGCTCGACATCCTCGAAGACCTCGCCCCTGTCTCTGACGCGCAACGCCGCGCGTACTGCGCAGTCGCCGTGGAGTGCACCGTCAAGTACCTCGCTGCGTGCCCCGACGTTATCGATGGTGAGTACGCCGGCGCTGTACGGCGGATCTGGCGCGGACGCGTGGCGGCGCTGCAGGCGCGCCGGAGCGGGCTGGTCTCTGGGGAGTTGGTGCGGTGGCGCGATGAGATAGAGAACGCGCTTGGGGAGGATTCCAGGGCGGCTCGCGAGAGGCTGGCGGGGTTGAATAGTCGGAGGGACGCGATGAATGAGGTGAGGGTGTATTTGAAGGAAGCGTGGGAAATGATGGGGCCTTCGTTTTTGGAAACGGTTGCGGCAACGGAGAAGAAGAACGATGAAGGTGCCTGTGATAATGGTAGTGGTAATGGTAATGATGATGATCATGATGATGGTGCATGCATGGAGGATGTGGCAATGCATTATGAGAATCAGGAACCATTGGAAGAGAGTGTTGATGCGAATCAGGAAGTGGGTGGGTCTGACTTAACTCCTCAGAGGGATAAAGCAATTCTGAAGCGGAATCCTCAGCTTAAACACAAACACTCTGCATTTCGTGCATCTCATAAGGGAAGGGGAATTAAAATATCTAGTCCGGAGGAAGTGGAGTCAACCAAACCATGGAGAAAACATGATCCTGTGCCTAGTGCTGAAGTTAAAAAAATTCGGGAATCCCTAAAATCAAGTTCTTTGGAGTTACAGGCATTGGTTAATGATCCTCTTCCCGATGCATTGCATATATCTGATGTTGTAAGATCCAAATTGGCAACTAGTGATACAAAAATTGAGCCACCGATTGAAAACCAGCATGAAGATGTAGAAGTACAGGATCCAGATGTTTGCCTGAGTATTGTACCTTTTCAGCCCAATGATGTCAATCTTGGGAAGAAGTCTTCTGTTCATTGTAGTAACATTCACCAGCCCAGCTTGATGGAACGGAACAGAAGTGCTCGTACCTTTGAGTGGGAGGATTCAATAGACAACTCACAACAAGCAAGACAGCCAAGGAGGAGGAAAAGGAAATGGAGTTCGTTGGAAGAAGAGACACTAAGGGCTGGTGTAAAAATGTTTGGAGAAGGAAACTGGGCAACAATCCGAAGTTTTTACAGTAACATATTTGAAAATAGAAGTGGAGTTGATCTGAAGGACAAGTGGAGAAACATGATACGGTGA 1407 0.5053 MNSDISRWVMEFLLRSSVPDSLIQKTLTALPLSPAEPRLKKNLLLRTLQTLLRRATLSETALDILEDLAPVSDAQRRAYCAVAVECTVKYLAACPDVIDGEYAGAVRRIWRGRVAALQARRSGLVSGELVRWRDEIENALGEDSRAARERLAGLNSRRDAMNEVRVYLKEAWEMMGPSFLETVAATEKKNDEGACDNGSGNGNDDDHDDGACMEDVAMHYENQEPLEESVDANQEVGGSDLTPQRDKAILKRNPQLKHKHSAFRASHKGRGIKISSPEEVESTKPWRKHDPVPSAEVKKIRESLKSSSLELQALVNDPLPDALHISDVVRSKLATSDTKIEPPIENQHEDVEVQDPDVCLSIVPFQPNDVNLGKKSSVHCSNIHQPSLMERNRSARTFEWEDSIDNSQQARQPRRRKRKWSSLEEETLRAGVKMFGEGNWATIRSFYSNIFENRSGVDLKDKWRNMIR 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00493 468 PANTHER MYB TRANSCRIPTION FACTOR 1 468 - -
Gma18g00493 468 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 412 468 IPR017930 -
Gma18g00493 468 SMART sant 416 468 IPR001005 -
Gma18g00493 468 ProSiteProfiles Myb-like domain profile. 412 467 IPR001005 -
Gma18g00493 468 MobiDBLite consensus disorder prediction 190 211 - -
Gma18g00493 468 MobiDBLite consensus disorder prediction 399 420 - -
Gma18g00493 468 CDD SANT_TRF 418 468 - -
Gma18g00493 468 Pfam Myb-like DNA-binding domain 417 466 IPR001005 -
Gma18g00493 468 Gene3D - 407 468 - -
Gma18g00493 468 PANTHER MYB TRANSCRIPTION FACTOR 1 468 - -
Gma18g00493 468 SUPERFAMILY Homeodomain-like 413 467 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00493 Gma-Chr18 4606805 4609879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00493 420 467 Single Myb Histone (SMH) Gene Family AT1G15720 50.000 1.69e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma18g00493 Myb_DNA-binding 1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00493 - K11111 gmx:100791258 896.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00493 18 4606805 4609879 Gma18g00493 18 4606805 4609879 ECH
Gma18g00493 18 4606805 4609879 Gma11g02001 11 33241452 33245693 GST