Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00488 ATGAAAGAAATGAACACCGAAATTGCGTGTATTCGCTTAGGAAATGCCTATGTTATCCCAGTGACATGCCCCACCATTGCCAGTGAGTTCTTGAGAAAACAAGATGCAACTTTTACATCAAGATCACTAAGCATGTCCGCTGATCTCATCACTAGCGGATACTCAACCACAATTTTTGTGCCCTTTGGGGACCAATTGAAGAAAATGAAGAAAATCATTACCAATGATTTTCTTTCTTCACCCAAGCACCTATGGCTTCATGACAAAAGGACTGAAGAAGCTGACAACCTTATGTTTTACGTCTACAACGAGTGCAAAAATGTGAACGATGGTGTCTGCATGCATTATTGTGGTAAACTCATCAGGAAAATTATTTTTAATACAAGGTATTTTGGGAAGGGCAGAGAGGATGAATGGCCTGGTTTTGAGGAAATGGAACATGTTGATTCCATCTTCGATTTGCTCAACTACATTTATGCATTTTCTGTTTCTGATTATATGCCATGCTTGAGGGGACTTGACTTGGATGGCCAAGAAAAGAAAGTGAAGGAAGCTTTGAGGATCATCAAGAAGTATCATGATCCCATTGTTCAAGTGAGAATTAAACAGTGGAATGATGGATTAAAGGTTGATGCAGAGGACTGGCTTGATTTTCTGATCTCTCTGAAAGATGCCAGCAATAACCCATCATTGACATTGGAGGAGATCAATGCACAAATTATAGAATTGATGCTTGCAACAGTGGACAATTCATCAAATACCTTTGAATGGGCACTTGCTGAAATGATAAACCAACCTGAGTTGCTTCACCGAGCCGTTGAAGAATTGGACACTGTGGTAGGGAAAGAGAGACTGGTCCAAGAATCAGATATACCTAAGCTCAACTATGTAAAGGCTTGTGCAAAAGAAGCTTTTCGCCTTCATCCAATTGCACCCTTTATTCCTCTCCATGTCTCTATGAGTGACACAATGGTGGGAAATTACTTCATTCCTAAAGAACCAAATTTGAAGTTCATATCATTTAGCACAGGAAGACGTGGCTGTCCCGGAGTGATGCTTGGCACCACAATGACCGTGATGCTATTAGCCAGGTTGCTCCATGGCTTCACTTGGAGTGCACCACCCAATGTTTCATCAATCAACCTTGCCGAGTCCAACGATGATATCCTTCTTGCAGAACCACTTGTGGCAATTGCTAAGCCAAGATTACCATCAGAGCTAGCTATACCAACTTGA 1236 0.4134 MKEMNTEIACIRLGNAYVIPVTCPTIASEFLRKQDATFTSRSLSMSADLITSGYSTTIFVPFGDQLKKMKKIITNDFLSSPKHLWLHDKRTEEADNLMFYVYNECKNVNDGVCMHYCGKLIRKIIFNTRYFGKGREDEWPGFEEMEHVDSIFDLLNYIYAFSVSDYMPCLRGLDLDGQEKKVKEALRIIKKYHDPIVQVRIKQWNDGLKVDAEDWLDFLISLKDASNNPSLTLEEINAQIIELMLATVDNSSNTFEWALAEMINQPELLHRAVEELDTVVGKERLVQESDIPKLNYVKACAKEAFRLHPIAPFIPLHVSMSDTMVGNYFIPKEPNLKFISFSTGRRGCPGVMLGTTMTVMLLARLLHGFTWSAPPNVSSINLAESNDDILLAEPLVAIAKPRLPSELAIPT 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00488 411 PRINTS E-class P450 group I signature 255 281 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma18g00488 411 PRINTS E-class P450 group I signature 26 47 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma18g00488 411 PRINTS E-class P450 group I signature 348 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma18g00488 411 PRINTS E-class P450 group I signature 235 252 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma18g00488 411 PRINTS E-class P450 group I signature 338 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma18g00488 411 Pfam Cytochrome P450 334 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma18g00488 411 Pfam Cytochrome P450 7 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma18g00488 411 Gene3D Cytochrome P450 1 387 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma18g00488 411 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 1 332 - -
Gma18g00488 411 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 333 408 - -
Gma18g00488 411 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 341 350 IPR017972 GO:0005506|GO:0016705
Gma18g00488 411 SUPERFAMILY Cytochrome P450 7 402 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma18g00488 411 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 332 - -
Gma18g00488 411 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 333 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00488 Gma-Chr18 4559635 4561415 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00488 1 407 Cytochrome P450 AT4G39950 48.115 1.09e-152 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00488 - K14984 gmx:100809902 702.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00488 18 4559635 4561415 Gma11g02015 11 33713806 33715772 GST