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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Gma18g00480
ATGAGTGACACACACCAAACTTTCATGTCCGTACAACCACCCCTGAATCTCCACCACCCCTTTAACCCACAAGCCTCAAGCTCAAATTTTGACGGCGACCCACCATGCAAAACCGCCGCAAAAACCAAACCTCCGCGCAAGAAGCTACTCCGGGTAATTCTCACCGACCATGACGCCACCGATTCTGACTCCTCCGGTGACGACGACGACCCAAAAAACCCACCGAAACACAAAAAGGTGAAAAGACAAATCACCCACATCACCATAAACCTTCCCTCTTTCTCAGAAGCCCCAACTCCAGCACCAATACCAACACCTTCTTCGTCTTCTTCTATTGATCCGACCCGTTTAACCCTACCCAAGAAACGACCCGCCGTGCCTCGCCGCCGTAGCAAGTTCCGCGGGGTCCGGCAGCGGCCATGGGGACGGTGGACCGCAGAAATCCGTGACCCGAATCAGAGAAAACGGGTCTGGCTCGGAACGTTCGACACGGCGGAGGAAGCCGCCGCCGTGTACGACGACGCCGCCTTGAAGCTCAAGGGCCCCAACGCCGTCACTAACTTCCCCCTCTCCGCCGCCGGAAAAACGGAACATGATACCGCGCCGCCGGAGGCGGCTTTCTCCGGCGAAGGTTTTTCATCTCCCACTTCCGTTCTCACTTACTTTGACGGAGACTCGACGCCACTTTACGGTTTCCGTTACGGCGAGGTCGACGCGTTCGGGTTTGACATCGATGCGCCGTTTAGTTTGACAGACGTTAACTTAGGGGTGCTGAGTCAGCGGTTCGGGAAGGAAGATTTCGGCGAGTTTGACCCGGACGAGTTCTTGACGTGGCCGAGTTAA
843
0.5623
MSDTHQTFMSVQPPLNLHHPFNPQASSSNFDGDPPCKTAAKTKPPRKKLLRVILTDHDATDSDSSGDDDDPKNPPKHKKVKRQITHITINLPSFSEAPTPAPIPTPSSSSSIDPTRLTLPKKRPAVPRRRSKFRGVRQRPWGRWTAEIRDPNQRKRVWLGTFDTAEEAAAVYDDAALKLKGPNAVTNFPLSAAGKTEHDTAPPEAAFSGEGFSSPTSVLTYFDGDSTPLYGFRYGEVDAFGFDIDAPFSLTDVNLGVLSQRFGKEDFGEFDPDEFLTWPS
280
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Gma18g00480
280
SMART
rav1_2
132
195
IPR001471
GO:0003700|GO:0006355
Gma18g00480
280
PANTHER
SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR
44
222
-
-
Gma18g00480
280
MobiDBLite
consensus disorder prediction
122
137
-
-
Gma18g00480
280
MobiDBLite
consensus disorder prediction
1
138
-
-
Gma18g00480
280
PRINTS
Ethylene responsive element binding protein signature
133
144
IPR001471
GO:0003700|GO:0006355
Gma18g00480
280
PRINTS
Ethylene responsive element binding protein signature
155
171
IPR001471
GO:0003700|GO:0006355
Gma18g00480
280
MobiDBLite
consensus disorder prediction
1
33
-
-
Gma18g00480
280
MobiDBLite
consensus disorder prediction
49
76
-
-
Gma18g00480
280
PANTHER
ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED
44
222
-
-
Gma18g00480
280
Gene3D
AP2/ERF domain
131
191
IPR036955
GO:0003700|GO:0006355
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Gma18g00480
Gma-Chr18
4480588
4481660
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Gma18g00480
48
221
AP2-EREBP Transcription Factor Family
AT4G27950
42.781
1.53e-37
134
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
AP2/ERF-ERF
Gma18g00480
AP2
6.9e-16
CL0081
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Gma18g00480
K13434
-
gmx:102660028
492.271
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Gma18g00480
18
4480588
4481660
Gma18g00480
18
4480588
4481660
ECH
Gma18g00480
18
4480588
4481660
Gma11g02030
11
34089788
34091311
GST
Gma18g00480
18
4480588
4481660
Gma14g02014
14
51158193
51160033
PCT
Gma18g00480
18
4480588
4481660
Gma02g02234
02
48391737
48392585
PCT
Gma14g02014
14
51158193
51160033
Gma18g00480
18
4480588
4481660
PCT
Gma02g02234
02
48391737
48392585
Gma18g00480
18
4480588
4481660
PCT
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