Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00476 ATGCTTCTAAACCTCTCCCATGCTTCCTTTCAGCAGGAAAGTATGACAGCCCACAAAGTTTACTCCAAATTTAACTGTCAATATCTTATTCCTTTCAGCAAACAACTCTCCATGAAGTTCCATTCTACTTCAGTGGCATCTTTTCTTTTTGTCATAGTTATTCTCTTTCCTCTGGCTATTGCTGATCTAAGTTCTGATAAGCAAGCCCTTCTTGATTTTGCTAATGCCGTCCCGCATCGTCGAAACCTGATGTGGAATCCATCAACCTCAGTCTGTACATCTTGGGTAGGCATCACTTGCAATGAAAATAGAACTCGTGTTGTTAAAGTCCGGCTCCCTGGAGTTGGACTAGTTGGCACCATCCCATCCAATACACTTGGCAAGCTTGGTGCTGTGAAAATTATTAGCCTTCGCTCCAACCTACTCAGTGGAAATCTTCCTGCTGACATTGGTTCTCTTCCTTCTCTTCAGTATCTCTACCTCCAACATAATAACCTTTCTGGTGATATACCTGCCTCATTGTCTCTCCAACTCGTTGTACTCGATTTGTCATATAATTCCTTCACCGGTGTTATTCCGACGACATTTCAAAATTTGTCGGAATTAACTAGTTTGAATCTCCAGAACAACTCGCTATCCGGACAGATACCTAATCTCAATGTCAATCTGCTCAAGCTTTTGAATTTAAGCTACAACCAATTGAATGGCTCAATTCCTAAAGCTCTTCAGATTTTTCCAAATTCTTCCTTTGAAGGAAACTCTCTCTTATGTGGACCACCTCTAAAGCCATGCTCTGTGGTTCCCCCTACACCTTCTCCTTCCTCGACTCCACCTCAATCAACTCCTGGAAGACAAAGCTCAAAAAACAAGTTGAGTAAAATAGCTATCATTGCTATTGCTGTTGGAGGAGCTGTGGTGCTATTCTTTGTTGCTCTTGTTTTCTTTATTTGCTGTTTAAAGAAGGAAGATGACAGAGGCTCCAATGTAATTAAAGGGAAGGGTCCTAGTGGTGGTAGGGGTGAGAAACCAAAAGAAGAGTTTGGAAGTGGGGTTCAAGAACCTGAGAAGAACAAGTTGGTTTTCTTTGAGGGAAGTTCTTATAATTTTGATCTTGAGGATTTGCTGCGAGCTTCGGCTGAAGTTCTGGGGAAGGGTAGTTATGGTACTGCATATAAGGCCATACTGGAGGAGTCAATGACAGTTGTGGTGAAAAGATTGAAAGAAGTTGTTGTAGGCAAGAAGGACTTTGAACAGCAGATGGAGATTATGGGAAGAGTTGGACAGCACACAAATGTTGTGCCGCTTCGTGCTTATTATTATTCAAAAGATGAAAAACTTTTGGTATATGACTATGTCCCTGGTGGCAACCTACACACACTCTTGCACGGTGGTAGGACAGGTGGAAGAACTCCATTAGACTGGGACTCTCGAATAAAAATATCCCTTGGAACAGCCAAAGGACTTGCCCACGTTCATTCTGTTGGTGGTCCCAAATTTACACATGGAAATATTAAGTCCTCAAATGTCCTCCTCAACCAAGATAATGATGGCTGCATTTCTGATTTTGGCCTTGCTCCCCTTATGAATGTTCCTGCTACCCCTTCTAGAACTGCAGGTTATCGTGCTCCTGAGGTGATTGAAGCCCGTAAACACTCTCATAAATCCGATGTGTATAGCTTTGGTGTCCTCCTTCTTGAGATGCTTACCGGGAAGGCTCCTCTCCAATCTCCGGGACGTGATGATATGGTTGATCTCCCTAGGTGGGTTCAGTCTGTTGTTAGGGAAGAGTGGACGGCCGAAGTTTTTGATGTGGAGCTAATGAGGTACCAAAACATTGAAGAAGAAATGGTTCAAATGTTGCAAATTGCCATGGCCTGTGTGGCAAAGATGCCAGATATGAGACCTAGCATGGATGAAGTAGTGAGAATGATCGAAGAGATCCGGCAATCTGACTCAGAGAACCGGCCATCTTCTGAAGAAAATAAATCTAAGGACTCAAATGTTTAA 2007 0.4285 MLLNLSHASFQQESMTAHKVYSKFNCQYLIPFSKQLSMKFHSTSVASFLFVIVILFPLAIADLSSDKQALLDFANAVPHRRNLMWNPSTSVCTSWVGITCNENRTRVVKVRLPGVGLVGTIPSNTLGKLGAVKIISLRSNLLSGNLPADIGSLPSLQYLYLQHNNLSGDIPASLSLQLVVLDLSYNSFTGVIPTTFQNLSELTSLNLQNNSLSGQIPNLNVNLLKLLNLSYNQLNGSIPKALQIFPNSSFEGNSLLCGPPLKPCSVVPPTPSPSSTPPQSTPGRQSSKNKLSKIAIIAIAVGGAVVLFFVALVFFICCLKKEDDRGSNVIKGKGPSGGRGEKPKEEFGSGVQEPEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTAYKAILEESMTVVVKRLKEVVVGKKDFEQQMEIMGRVGQHTNVVPLRAYYYSKDEKLLVYDYVPGGNLHTLLHGGRTGGRTPLDWDSRIKISLGTAKGLAHVHSVGGPKFTHGNIKSSNVLLNQDNDGCISDFGLAPLMNVPATPSRTAGYRAPEVIEARKHSHKSDVYSFGVLLLEMLTGKAPLQSPGRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMACVAKMPDMRPSMDEVVRMIEEIRQSDSENRPSSEENKSKDSNV 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00476 668 Gene3D Ribonuclease Inhibitor 65 177 IPR032675 -
Gma18g00476 668 MobiDBLite consensus disorder prediction 328 351 - -
Gma18g00476 668 Pfam Leucine Rich Repeat 155 174 IPR001611 GO:0005515
Gma18g00476 668 Pfam Leucine rich repeat 177 234 IPR001611 GO:0005515
Gma18g00476 668 PANTHER LRR RECEPTOR-LIKE KINASE 26 668 - -
Gma18g00476 668 CDD STKc_IRAK 382 647 - -
Gma18g00476 668 Gene3D Phosphorylase Kinase; domain 1 344 451 - -
Gma18g00476 668 ProSiteProfiles Protein kinase domain profile. 376 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00476 668 MobiDBLite consensus disorder prediction 266 286 - -
Gma18g00476 668 ProSitePatterns Protein kinases ATP-binding region signature. 382 413 IPR017441 GO:0005524
Gma18g00476 668 PANTHER OS05G0588300 PROTEIN 26 668 - -
Gma18g00476 668 Pfam Protein kinase domain 379 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00476 668 Gene3D Ribonuclease Inhibitor 178 265 IPR032675 -
Gma18g00476 668 ProSiteProfiles Leucine-rich repeat profile. 155 177 IPR001611 GO:0005515
Gma18g00476 668 Pfam Leucine rich repeat N-terminal domain 64 101 IPR013210 -
Gma18g00476 668 MobiDBLite consensus disorder prediction 646 668 - -
Gma18g00476 668 Gene3D Transferase(Phosphotransferase) domain 1 452 667 - -
Gma18g00476 668 ProSiteProfiles Leucine-rich repeat profile. 201 223 IPR001611 GO:0005515
Gma18g00476 668 MobiDBLite consensus disorder prediction 337 351 - -
Gma18g00476 668 SUPERFAMILY L domain-like 65 264 - -
Gma18g00476 668 SUPERFAMILY Protein kinase-like (PK-like) 380 645 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00476 Gma-Chr18 4463898 4467728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00476 23 668 Receptor kinase-like Gene Family AT5G58300 66.514 0.0 867
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma18g00476 Pkinase 9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00476 - - gmx:100786831 1196.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00476 18 4463898 4467728 Gma18g00476 18 4463898 4467728 ECH
Gma18g00476 18 4463898 4467728 Gma11g02033 11 34110148 34114422 GST
Gma18g00476 18 4463898 4467728 Gma14g02017 14 51175805 51181028 PCT
Gma18g00476 18 4463898 4467728 Gma02g02236 02 48411474 48415266 PCT
Gma14g02017 14 51175805 51181028 Gma18g00476 18 4463898 4467728 PCT
Gma02g02236 02 48411474 48415266 Gma18g00476 18 4463898 4467728 PCT