Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00473 ATGTATCTTTCAAAGTGTTTCAAGCATGAAGTTGTTTTCATCTTGTGGTTCTGCTGCTATTTGCTACATGCTGCTGGGCAGAATAACATCACTGATCCCGTTGAAGTTGATGCATTGAGAGCCATTAAGAGTCGTTTGATTGATCCTAATGGAAATTTGAGCAATTGGAATGATGGAGACCCATGTACGTCAAGGTGGAAAGGAGTTTTGTGCTTCAATGAAACAAAAGAGGATGGCCATCTGCATGTTGAAGAATTGCAATTACTGAGATTGAACTTGTTGGGAACTTTGGCACCAGATCTTGGCAAATTAACTTATATGAAAAGATTGAACTTTATGTGGAACAACATAAGTGGGAGTATTCCAAATGAAGTTGGCAATATCACATCTTTGGAACTCTTGCTTCTGAATGGAAATAAATTAACAGGTTCACTACCAGAGGAGATTGGCTATCTTCCAAACTTGGACAGAATACAAATTGATCAGAACCAAATATCAGGACCTATACCTACGTCATTTGCAAACCTGAACAAAACAAAGCACTTTCACATGAACAATAATTCACTTAGTGGACAAATCCCACCAGAGCTTTCCCGATTATCAAATCTTGTTCACCTTCTTCTCGACAACAACAACTTATCAGGATATCTTCCCCGTGAGCTGGCTGATATGCCAAGCTTACTTATCATTCAACTTGATAACAACAACTTTGAGGGAAATAGCATTCCTGATACATATGCCAACATGTCAAAGTTGTTGAAGATGAGCCTTAGGAATTGCAGCTTGCAAGGACCAATTCCTGATTTAAGCAGGATACCTCACCTTCTTTACCTTGACCTCAGTTTCAACCAGTTGAATGAATCAATTCCTCCCAATAAGCTTTCTGAACATATCACAACCATTGATTTATCAAGCAACCGCCTTACTGGAAATATTCCATCCTACTTTGCTGATCTTCCACGTCTTCAGAAACTGTCACTTGCAAACAATTCATTGGATGGCACTGTTTCTTCCTCCATTTGGCAGAATAAGACTTCAAATGGAACAAAAACATTTCTCTTGGAGTTGGAAAATAATAATCTTACAACCATATCAGGCAGTATTGATCTTCCTCCAAATGTCACAGTTGGGCTTAATGGAAATCCCCTTTGCTCAAATGTAACCCTGACTCAGTTCTGTGGATCTGAAGGGGCTAATGTAACAGATGGTTCATTTACAACAAATTCCAGTTCCTGTCCCCCTCAAGCATGCCCTCCTCCTTATGAATACTCTGTGAATTGTTTCTGTGGGCTTCCATTGATTGTTGACTATCGGCTGAAAAGTCCTGGATTTTCAAACTTTCTTCCATATTTGAATGATTTTGAGGTCTACATGGCTTCTGGTGTTAAAATATCTACCAATCAGCTACAATATGATTTTTATTGGCAAGTAGGACCTCGGCTGAGAATGAACTTGAAGTTTTTTCCTGCATATGTTGATAACAGTAGTAGTCATACTTTCAATAGAAGTGAGCTCCTACGGCTCACAAGCATGTTCACAGGATGGCTAATTCCAGACAGTGATTTGTTTGGGCCTTATGAACTGATGGGTTTTAATCTTTTGGGTCCTTACCAGGATGAGATTGGCAGGAGTTCAAAATCAGGGATAAGTACGGGTGCGCTGGTTGGCATAGTCATAGGGGCAATTGCCTTTGCAGTGACGTTATCTGCAATTGTTACCATTCTTATATTGAGAATAAGATTGAGAGATTATCATGCCGTTTCCAGGCGACGTCATGCATCCAAGATCTCTATAAAAATTGATGGTGTAAGGGCCTTTACTTATGGAGAATTGTCCTCTGCCACAAACAATTTCAGCACCTCTGCTCAAGTTGGACAAGGGGGCTATGGGAAGGTTTATAAAGGGGTTCTTTCTGATGGCACAATTGTTGCCATAAAACGTGCACAAGAGGGATCCCTGCAAGGTGAGAAGGAGTTCCTTACAGAAATATCATTACTATCAAGGTTACATCATCGCAATCTTGTGTCTCTGATTGGATACTGTGATGAAGAAGGTGAACAGATGCTGGTTTATGAATTTATGTCTAATGGCACATTGAGGGATCACCTTTCTGTTACAGCTAAAGATCCTCTGACTTTTGCCATGAGATTGAAGATGGCATTAGGGGCAGCTAAAGGTCTTTTGTATCTACACTCGGAAGCTGATCCTCCAATATTTCACCGAGATGTAAAGGCCAGCAACATATTATTGGACTCTAAGTTTTCTGCAAAAGTGGCTGATTTTGGACTTTCACGGCTTGCTCCAGTTCCAGATATGGAAGGAGTTGTGCCTGGTCATGTATCTACAGTGGTAAAGGGGACCCCGGGTTACCTTGATCCAGAGTACTTCCTAACTCGCAAATTGACTGACAAGAGTGATGTTTATAGTCTTGGTGTCGTATTTCTGGAACTTTTGACAGGGATGCATCCTATCTCTCACGGCAAAAATATTGTTAGAGAGGTTAACGTTGCGTACCAATCTGGCGTGATATTTTCAATTATCGATGGACGAATGGGCTCTTATCCATCTGAGCATGTGGAGAAATTTTTGACTTTGGCCATGAAGTGTTGCGAAGATGAGCCAGAGGCTCGGCCTAGAATGGCAGAAGTGGTCAGAGAGCTTGAAAACATATGGTCTACAATGCCAGAATCAGATACCAAGAGAGCTGAATTTATGTCCAGTGATTCTGGCAAAGCAGACAGTCACAGTACACCATCTTCATCTTCTGCCTCTGCTTCTATTATGAAGACACCTTTTGTATCAGGAGATGTGTCAGGTAGTGACCTTGTTAGTGGAGTGATACCAAGCATCAAGCCAAGATAG 2862 0.4095 MYLSKCFKHEVVFILWFCCYLLHAAGQNNITDPVEVDALRAIKSRLIDPNGNLSNWNDGDPCTSRWKGVLCFNETKEDGHLHVEELQLLRLNLLGTLAPDLGKLTYMKRLNFMWNNISGSIPNEVGNITSLELLLLNGNKLTGSLPEEIGYLPNLDRIQIDQNQISGPIPTSFANLNKTKHFHMNNNSLSGQIPPELSRLSNLVHLLLDNNNLSGYLPRELADMPSLLIIQLDNNNFEGNSIPDTYANMSKLLKMSLRNCSLQGPIPDLSRIPHLLYLDLSFNQLNESIPPNKLSEHITTIDLSSNRLTGNIPSYFADLPRLQKLSLANNSLDGTVSSSIWQNKTSNGTKTFLLELENNNLTTISGSIDLPPNVTVGLNGNPLCSNVTLTQFCGSEGANVTDGSFTTNSSSCPPQACPPPYEYSVNCFCGLPLIVDYRLKSPGFSNFLPYLNDFEVYMASGVKISTNQLQYDFYWQVGPRLRMNLKFFPAYVDNSSSHTFNRSELLRLTSMFTGWLIPDSDLFGPYELMGFNLLGPYQDEIGRSSKSGISTGALVGIVIGAIAFAVTLSAIVTILILRIRLRDYHAVSRRRHASKISIKIDGVRAFTYGELSSATNNFSTSAQVGQGGYGKVYKGVLSDGTIVAIKRAQEGSLQGEKEFLTEISLLSRLHHRNLVSLIGYCDEEGEQMLVYEFMSNGTLRDHLSVTAKDPLTFAMRLKMALGAAKGLLYLHSEADPPIFHRDVKASNILLDSKFSAKVADFGLSRLAPVPDMEGVVPGHVSTVVKGTPGYLDPEYFLTRKLTDKSDVYSLGVVFLELLTGMHPISHGKNIVREVNVAYQSGVIFSIIDGRMGSYPSEHVEKFLTLAMKCCEDEPEARPRMAEVVRELENIWSTMPESDTKRAEFMSSDSGKADSHSTPSSSSASASIMKTPFVSGDVSGSDLVSGVIPSIKPR 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00473 953 ProSitePatterns Protein kinases ATP-binding region signature. 624 646 IPR017441 GO:0005524
Gma18g00473 953 SUPERFAMILY L domain-like 44 393 - -
Gma18g00473 953 Pfam Protein kinase domain 619 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00473 953 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 10 923 - -
Gma18g00473 953 Gene3D Ribonuclease Inhibitor 34 186 IPR032675 -
Gma18g00473 953 MobiDBLite consensus disorder prediction 909 933 - -
Gma18g00473 953 MobiDBLite consensus disorder prediction 898 953 - -
Gma18g00473 953 SUPERFAMILY Protein kinase-like (PK-like) 603 911 IPR011009 -
Gma18g00473 953 CDD STKc_IRAK 624 890 - -
Gma18g00473 953 ProSitePatterns Serine/Threonine protein kinases active-site signature. 738 750 IPR008271 GO:0004672|GO:0006468
Gma18g00473 953 ProSiteProfiles Protein kinase domain profile. 618 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00473 953 Gene3D Ribonuclease Inhibitor 292 416 IPR032675 -
Gma18g00473 953 SMART serkin_6 618 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00473 953 Gene3D Ribonuclease Inhibitor 187 291 IPR032675 -
Gma18g00473 953 Gene3D Transferase(Phosphotransferase) domain 1 694 912 - -
Gma18g00473 953 Pfam Leucine rich repeat N-terminal domain 35 71 IPR013210 -
Gma18g00473 953 Gene3D Phosphorylase Kinase; domain 1 588 693 - -
Gma18g00473 953 SMART LRR_typ_2 272 297 IPR003591 -
Gma18g00473 953 SMART LRR_typ_2 224 248 IPR003591 -
Gma18g00473 953 SMART LRR_typ_2 200 223 IPR003591 -
Gma18g00473 953 SMART LRR_typ_2 319 343 IPR003591 -
Gma18g00473 953 SMART LRR_typ_2 128 152 IPR003591 -
Gma18g00473 953 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 10 923 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00473 Gma-Chr18 4406939 4418249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00473 18 900 Receptor kinase-like Gene Family AT5G01950 58.547 0.0 998
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Gma18g00473 Pkinase 7.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00473 - - gmx:100786467 1803.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00473 18 4406939 4418249 Gma18g00473 18 4406939 4418249 ECH
Gma18g00473 18 4406939 4418249 Gma11g02038 11 34251216 34270142 GST
Gma18g00473 18 4406939 4418249 Gma14g02019 14 51217053 51228706 PCT
Gma14g02020 14 51231637 51250627 Gma18g00473 18 4406939 4418249 PCT