Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00460 atgtgggaGATTGCAGAAGCGTTTTTGGAGAAACGTTTAAAGAATGCAGTGGTCACTGTGCCTGCTTATTTCAATGATTCTCAGCGTAAAGCTACCATAGATGCTGGAAAAATTGCTGGTCTCAATGTTATGCGGATAATCAATGAACCCACTGCTGCAGCCATTGCATATGGCCTCGACAGGAGGACTAATAATTGTGTTGGAGAGCGAAAAATTTTCATCTTTGACCTTGGTGGTGGTACTTTTGATGTGTCTCTCCTTACTCATAAGGGTAAGATCTTCCAAGTTAAGGCAACAACTGGAAATGGTCACCTTGGGGGAGAGGAAATCGATAACAGAATGGTGGACTACTTTGTAAAGGAGATCAAAAGGAAAAAAAAAGTAGACATTAGTGGGAACCCAAAAGCGCTAAGGAGGTTAAAAACTGCGTGTGAGAGGTCAAAAAGAATACTCTCATGTGCTGTAGCTACTCACATTGAGACATATGCTTTATCTGATGGCATTGACTTCTGTTCTTCAACCACTCGTGCAAGGTTTGAGGAAATCAATATGGATCTCTTTAAGGAGTGTATGGAGACAGTAGATAAGTGTCTTACTGATGCTGAAATGGACAAGAGCAGTGTACATGATGTTATCCTTGTTGGTGGTTCTTCTAGGATTCCCAAAGTGCAAGAGCTATTGCCAGGCTTTTTCAATGGAAAGGATCTGTGCAGGGAGCATCAACACTGA 729 0.4129 MWEIAEAFLEKRLKNAVVTVPAYFNDSQRKATIDAGKIAGLNVMRIINEPTAAAIAYGLDRRTNNCVGERKIFIFDLGGGTFDVSLLTHKGKIFQVKATTGNGHLGGEEIDNRMVDYFVKEIKRKKKVDISGNPKALRRLKTACERSKRILSCAVATHIETYALSDGIDFCSSTTRARFEEINMDLFKECMETVDKCLTDAEMDKSSVHDVILVGGSSRIPKVQELLPGFFNGKDLCREHQH 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00460 242 Pfam Hsp70 protein 1 238 IPR013126 GO:0005524|GO:0140662
Gma18g00460 242 ProSitePatterns Heat shock hsp70 proteins family signature 3. 211 225 IPR018181 -
Gma18g00460 242 PRINTS 70kDa heat shock protein signature 208 224 - -
Gma18g00460 242 PRINTS 70kDa heat shock protein signature 16 36 - -
Gma18g00460 242 PRINTS 70kDa heat shock protein signature 80 90 - -
Gma18g00460 242 Gene3D Actin; Chain A, domain 4 106 189 - -
Gma18g00460 242 ProSitePatterns Heat shock hsp70 proteins family signature 2. 74 87 IPR018181 -
Gma18g00460 242 SUPERFAMILY Actin-like ATPase domain 69 236 IPR043129 -
Gma18g00460 242 Gene3D - 1 239 - -
Gma18g00460 242 Gene3D - 62 237 - -
Gma18g00460 242 PANTHER HEAT SHOCK PROTEIN 70KDA 1 238 IPR013126 GO:0005524|GO:0140662
Gma18g00460 242 SUPERFAMILY Actin-like ATPase domain 1 61 IPR043129 -
Gma18g00460 242 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00460 Gma-Chr18 4279511 4280239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00460 1 238 Calmodulin-binding Proteins AT5G02500 71.008 7.86e-121 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00460 K03283 - gmx:102667578 378.637