Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00420 ATGATGAATTTGAAACTCGTTGCTCTTCCAGCAAGAATCATTGTTGCACCACCACCCGTCCCTAATGGTTCTACTCCTTCTGCTATTAAAACCCGCATGTGTAACAAATTCAATACTGTTGAAGGATGCAAATTTGGCAACAAGTGTCATTTTGCATTTTTTCCCATGTTGTTCCTTCGTCAGCATGTTGAGTGGAGTAAGATCCAGACGCCTACGGATCAAGTAGTGGTGCCTTATGACACTTTGGCACCAATTCCTGATGGTTCTTCAGAGGTGAAGAACCTCTTGGACAAGCTTGTGGTGTTGAAGCTCAATGGAGGCTTGGGGACAACTATGGGTTGTACTGGCCCAAACTCCTGGAAATTGCCCAAGTCCTAG 378 0.4497 MMNLKLVALPARIIVAPPPVPNGSTPSAIKTRMCNKFNTVEGCKFGNKCHFAFFPMLFLRQHVEWSKIQTPTDQVVVPYDTLAPIPDGSSEVKNLLDKLVVLKLNGGLGTTMGCTGPNSWKLPKS 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00420 125 PANTHER - 61 119 IPR016267 GO:0003983|GO:0006011
Gma18g00420 125 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 56 121 IPR029044 -
Gma18g00420 125 ProSiteProfiles Zinc finger C3H1-type profile. 28 52 IPR000571 GO:0046872
Gma18g00420 125 Gene3D - 22 52 - -
Gma18g00420 125 PANTHER UTP-GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE 61 119 - -
Gma18g00420 125 Pfam UTP--glucose-1-phosphate uridylyltransferase 61 119 IPR002618 GO:0070569
Gma18g00420 125 SUPERFAMILY Nucleotide-diphospho-sugar transferases 32 119 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00420 Gma-Chr18 3864851 3869314 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Gma18g00420 UDPGP 4.7e-15 CL0110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00420 K00963 - gmx:102661410 113.235