Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00418 ATGGCGATTCAAGATCAAAATGGATTTAACAGATCACAGGGTGGTCCTCCAATAGGAGGTGGAGTATCTTTGAGTTCTGGAGTGCATTCTGTCACACATATTCAACTTAGTGACCAGTTTTCTTGTGGCAACGACTATGCTCTGAAGGTAAGAAAGCCTTATACTATCACCAAACAGAGAGAGCGATGGACAGATGAAGAACATAAGAAGTTCCTTGAAGCTTTAAAGCTGTACGGACGGGCTTGGCGACGTATTGAAGAACATGTTGGCACAAAGACTGCTGTTCAGATTCGAAGTCATGCTCAGAAGTTTTTTTCTAAGCTTCTTCGCGATCCTACTGGGAACAATACAAACACAGTGGAGTCAATTGAAATTCCTCCTCCAAGGCCGAAACGAAAGCCAGTGCATCCTTACCCTCGTAAACTAGTTGAGACCCCTAATAAAGAAATTTTGATCCCAGAACAACTTATGAAGTCTAATTCTCTGAAGTCATCAGACTTTGATCAAGAAAACCAATCTCCAAAATCAGTATTATCAGGAGTTGGTTCAGACAGCCTTGGCTCCTCTGATTCAGACACACCATATGGAAGTTTGTCGCCCATGTCATCCATTAGTGGCATCCATACAAGCAGTTTTACACGTGCTGAGCCCAAAACAACATCTGAGGAAGCTGGGATGGACACTGATTCAGCTCATGATGAGAAACCTCTTATGAAATTCAAGCTTCCTCCAAATGAATGTGTTTCCATCAAAGATGACACAGCAGAAGAATCTTCCGGTCGGACTTTCAAACTTTTCGGAATGACTCTATTTGTAACAGACACCTGCAAACCATCTCCAACAATCGAGGCATGCAAACCGATACCTCTAAACATTCGTGTGCGATGCCTTTCCTCCTCCATGGGGGATGATGGCAAATTGGAACTTCTTGGCCACTCTACAGCAAGTGAAACATCAGCAATATCCAAGCTAAAGGTGAGAGTGGGACCTGAAGCATGTGGTAAAGGGTTTGTGCCATATAAAAGATGCATATCTGTTGTGACAGCTGATAATAGAGAAGAGCAATGCATCCATCTTTCCTTGTAG 1086 0.43 MAIQDQNGFNRSQGGPPIGGGVSLSSGVHSVTHIQLSDQFSCGNDYALKVRKPYTITKQRERWTDEEHKKFLEALKLYGRAWRRIEEHVGTKTAVQIRSHAQKFFSKLLRDPTGNNTNTVESIEIPPPRPKRKPVHPYPRKLVETPNKEILIPEQLMKSNSLKSSDFDQENQSPKSVLSGVGSDSLGSSDSDTPYGSLSPMSSISGIHTSSFTRAEPKTTSEEAGMDTDSAHDEKPLMKFKLPPNECVSIKDDTAEESSGRTFKLFGMTLFVTDTCKPSPTIEACKPIPLNIRVRCLSSSMGDDGKLELLGHSTASETSAISKLKVRVGPEACGKGFVPYKRCISVVTADNREEQCIHLSL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00418 361 MobiDBLite consensus disorder prediction 109 123 - -
Gma18g00418 361 MobiDBLite consensus disorder prediction 126 143 - -
Gma18g00418 361 Gene3D - 62 108 - -
Gma18g00418 361 SMART sant 59 107 IPR001005 -
Gma18g00418 361 MobiDBLite consensus disorder prediction 157 218 - -
Gma18g00418 361 ProSiteProfiles SANT domain profile. 58 112 IPR017884 -
Gma18g00418 361 PANTHER SWI/SNF COMPLEX-RELATED 30 282 - -
Gma18g00418 361 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 109 IPR017930 -
Gma18g00418 361 SUPERFAMILY Homeodomain-like 54 108 IPR009057 -
Gma18g00418 361 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 58 107 IPR006447 GO:0003677
Gma18g00418 361 PANTHER PROTEIN REVEILLE 7-RELATED 30 282 - -
Gma18g00418 361 Pfam Myb-like DNA-binding domain 60 103 IPR001005 -
Gma18g00418 361 MobiDBLite consensus disorder prediction 1 24 - -
Gma18g00418 361 ProSiteProfiles Myb-like domain profile. 55 105 IPR001005 -
Gma18g00418 361 MobiDBLite consensus disorder prediction 220 236 - -
Gma18g00418 361 CDD SANT 62 105 IPR001005 -
Gma18g00418 361 MobiDBLite consensus disorder prediction 109 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00418 Gma-Chr18 3847585 3851074 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma18g00418 Myb_DNA-binding 7.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00418 - - gmx:780539 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00418 18 3847585 3851074 Gma11g02147 11 36508836 36510856 GST