Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00415 ATGAATATGGCTCCTGTTTCATTGCCTCCTGGGTTTAGGTTCCACCCCACCGACGAGGAACTCGTTTCTTATTACCTCAAAAGAAAGATAAATGGTCGTAAGATTGAGTTAGAGATCATCCATGAAGTTGATCTTTATAAGTGTGAACCATGGGACTTGCCAGGGAAGTCATTGTTACCGGGTAAAGATTTGGAGTGGTATTTCTTCAGCCCTAGAGATAGGAAGTACCCAAATGGATCAAGGACCAATCGTGCAACCAAATCTGGGTATTGGAAGGCCACAGGGAAGGACCGTAAGGTGAACTCTGAGAGCCGTGCAATAGGGATGAAGAAAACCCTAGTTTACTATAGAGGTAGGGCACCACATGGATGTCGCACAGGTTGGGTTATGCATGAGTATCGTCTTGATGAGACTCAGTGCGAAACTAATTCAGGCTTGCAGGATGCATATGCTCTTTGCCGTGTGTGCAAGAAGACTGCAGTGATTCCCCCAAAGGTTGGAGATCAGCACTATGTTAATGTTCCTAGCCATGTAAATCAGATTACAAGTGATCAATCATCAAGCATTGACATTGAGATATACTCAGAAGGAAGAGGTGAAGTTTTAGAGAGCTCAAATTATTTGATGCCGTGGGATACATGCCCATCCCCAAACATAAATATTGGGTCTGCTCTCAATATCAATATCAATGGTGGGACAAGGGATAATAACATTGGGACATGGTCACACTTCTTAGCAGAAGACTTACCCAATCTTCCAACATCTGCTTCTTCATTTCCCAATTATGGATCTATGAGTTACCCTCCATCAAAGGTGGATATAGCACTAGAGTGTGCAAGGATGCAACATAGGTTTACCATGCCTCCTTTGGAGGTGCAGGACTTCCCTCAAGTTGGCATTTCCGAGCTGAAGATGGCACAAGCCTCGGGTTCCAATATGTGTGGAGGAAGCAGAAATAATGAAACAGATATCTTGCAGGAAATTCTTTCAGTTGCTCATGCTTCCCATGAGTTAATAAATCAGTCCAACTACTCATCACATTCACAGGCATTGGGTGCCAATGAAAATAACTATGCTGCACCTCATGAAAGTGATTTTACTTTTATGGTTGGCAACAATTACAATCGTGTGAATGATATGAACACCATGGGATTTGTTGACAAAGCATGGGAAGACCCTAACGCAAGATCAATAGAGATCGGGGATCTTGATGATGGATTCAAGACAGAGAGGATGGTGGAGAACTTAAGATGGGTTGGAATGTCCAGCAAAAATATGGAAAAGGGCTTTATGGAGGAGCAAAAGATTGTGCCGATTGAGCATATCTCAAACTTCCAAACTAACAGGGAAGAAAACGAGGTGCAAGGATCTCAGCAACACAATAACAACAAAGAACTCAATGACACTGACATTGACGATTTCTCAATGGGGTTCATCAATGGTGACGACCACAATGAGAACTTCATAGATGAGGGTAACATTAATTATTCAAATTCTACAAACTTTGAGGTTGTTGAGGAAACAAAAGTCAGTCATGGAATGTTTGTCTCCACTCGCCAAGTAGCTGACACATTCTTTCATCAAATAGCTCCTTCACAAACCGTCAAAGTTCAACTCAATCCATTAATGGCTGAAGATCAATCTATAGAGAATGCAGTAATGGTTAACCAAGGGCCCCCTTTCTTTAGAAAGTTCAAGGCCTATGTGATGGGGAAGCTGACAAAGTCATCAAACACAATAGCAAGTGCCCTTGTGTTCCTCTTTGCACTTTTGTTGATGCATTGTGTGTTTTTGAAGGAACAAGTGGAAGATTTGAAATCGGACCCCAAATGCTTTGATGGTGCTAACTCCATGAAGAAAATTATGAGACAACCAGCTGAGAACATCATATGGAATGAACAAGAAAATTTTTGGTCTGTTGGTATTAAATGCGGGAAAGGATTTAGTGTGGTCTTGAAGAAGATAGGCATTTTCCTCACCATATCATTGGCTCTTTGTACCATGTGGGCTAACCATGTTATAGTTGACTCTTAG 2034 0.4179 MNMAPVSLPPGFRFHPTDEELVSYYLKRKINGRKIELEIIHEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSESRAIGMKKTLVYYRGRAPHGCRTGWVMHEYRLDETQCETNSGLQDAYALCRVCKKTAVIPPKVGDQHYVNVPSHVNQITSDQSSSIDIEIYSEGRGEVLESSNYLMPWDTCPSPNINIGSALNININGGTRDNNIGTWSHFLAEDLPNLPTSASSFPNYGSMSYPPSKVDIALECARMQHRFTMPPLEVQDFPQVGISELKMAQASGSNMCGGSRNNETDILQEILSVAHASHELINQSNYSSHSQALGANENNYAAPHESDFTFMVGNNYNRVNDMNTMGFVDKAWEDPNARSIEIGDLDDGFKTERMVENLRWVGMSSKNMEKGFMEEQKIVPIEHISNFQTNREENEVQGSQQHNNNKELNDTDIDDFSMGFINGDDHNENFIDEGNINYSNSTNFEVVEETKVSHGMFVSTRQVADTFFHQIAPSQTVKVQLNPLMAEDQSIENAVMVNQGPPFFRKFKAYVMGKLTKSSNTIASALVFLFALLLMHCVFLKEQVEDLKSDPKCFDGANSMKKIMRQPAENIIWNEQENFWSVGIKCGKGFSVVLKKIGIFLTISLALCTMWANHVIVDS 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00415 677 Gene3D NAC domain 17 161 IPR036093 GO:0003677|GO:0006355
Gma18g00415 677 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 3 396 - -
Gma18g00415 677 Pfam No apical meristem (NAM) protein 9 135 IPR003441 GO:0003677|GO:0006355
Gma18g00415 677 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
Gma18g00415 677 SUPERFAMILY NAC domain 4 158 IPR036093 GO:0003677|GO:0006355
Gma18g00415 677 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 3 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00415 Gma-Chr18 3801136 3805443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00415 3 668 NAC Transcription Factor Family AT1G65910 44.006 1.84e-163 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma18g00415 NAM 2.2e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00415 - - gmx:100818019 1372.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00415 18 3801136 3805443 Gma11g02151 11 36552688 36557239 GST