Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00410 ATGTCACCACTTCAAACATCCTTCTTCGTCTTCTTCCTATGTTTTCTCAATGCCTCTTCTTCTATTTTCGCCACCACCCAATTTGACTTTGGGACTTTAACTATGAGCACTTTGAAGcttctcggcgatgcccatttgaacaacaacaccgtcagcctcaccggcgaccccgccgtccccaactccgccgccggaagagccctttactccgcccctgtcagattccggcaaccgggaaccccttctccggcgagcttctccaccttcttctccttctccgtcaccaacctcaacccctcctccgtcggcggcggcctcgccttcgttatctcgccggactcctccgccgtcggcgaccccggcggcttcctcggcctccaaaccgccggcggcggaaacttcctcgccgtggaattcgacaccctgatggacgtggagttcagcgacatcaatggaaaccacgtcggattagacctaaatagcgtcgtttcgacgcaagttagcgacttgggaggcatcggagtggatctcaaaagcggtgactcggtgaacgcgtggatcgagtacgacGGAAACGCCAAAGGGTTGCGCGTTTGGGTCTCGTACTCGAACGTTCGGCCAAAAGATCCGATTTTGAAGGTGGATCTCGATGTGGGTATGTACGTTAACGATTTCATGTATGTGGGGTTTTCTGGGTCTACCCAAGGTAGCACCGAGGTTCACAGTGTTGAGTGGTGGAGTTTTAACTCCTCCTTTGATTCCGCGGCGGCTCCTGCCGCCTCGTCAGCACCCTCCGCCACGTCAGAGCAAAAGGAGAGTAGGTCGTCTAGGAAGAGTACTGTGGGGGCAGTTGCTGGGGTTGTCACTGCTGGTGCTTTTGTTCTTGCTCTCTTTGCTGGTGCATTGATTTGGGTGTATTCTAAGAAGGTTAAGTATGTGAAGAAGCTCGATCATTCTATTGAGTCGGAGATTATTAGAATGcctaaggagtttagctacaaggagcttaaattggccactaaggggttcagtgctaatagggtcattggtcatgATAGTGAATCTGAGTGTAATAATGGTATGATCACCATCTCTACCTCTTCATCAGAGAGCAGCTTCAATGGCAGAGATAGTCTGATGGAAGTCTAG 1149 0.2533 MSPLQTSFFVFFLCFLNASSSIFATTQFDFGTLTMSTLKLLGDAHLNNNTVSLTGDPAVPNSAAGRALYSAPVRFRQPGTPSPASFSTFFSFSVTNLNPSSVGGGLAFVISPDSSAVGDPGGFLGLQTAGGGNFLAVEFDTLMDVEFSDINGNHVGLDLNSVVSTQVSDLGGIGVDLKSGDSVNAWIEYDGNAKGLRVWVSYSNVRPKDPILKVDLDVGMYVNDFMYVGFSGSTQGSTEVHSVEWWSFNSSFDSAAAPAASSAPSATSEQKESRSSRKSTVGAVAGVVTAGAFVLALFAGALIWVYSKKVKYVKKLDHSIESEIIRMPKEFSYKELKLATKGFSANRVIGHDSESECNNGMITISTSSSESSFNGRDSLMEV 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00410 382 Pfam Legume lectin domain 26 258 IPR001220 GO:0030246
Gma18g00410 382 Gene3D - 24 273 - -
Gma18g00410 382 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 253 IPR013320 -
Gma18g00410 382 CDD lectin_legume_LecRK_Arcelin_ConA 26 249 IPR001220 GO:0030246
Gma18g00410 382 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2 20 362 - -
Gma18g00410 382 PANTHER - 20 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00410 Gma-Chr18 3744228 3746261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00410 12 351 Receptor kinase-like Gene Family AT5G03140 56.948 6.07e-129 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00410 - - gmx:100815895 591.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00410 18 3744228 3746261 Gma18g00410 18 3744228 3746261 ECH
Gma18g00410 18 3744228 3746261 Gma11g02159 11 36633037 36635075 GST
Gma18g00410 18 3744228 3746261 Gma14g02059 14 51700303 51702656 PCT
Gma18g00410 18 3744228 3746261 Gma02g02283 02 48905730 48908097 PCT
Gma14g02059 14 51700303 51702656 Gma18g00410 18 3744228 3746261 PCT
Gma02g02283 02 48905730 48908097 Gma18g00410 18 3744228 3746261 PCT