Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00405 ATGCCCTTGGAAGGGATTTTCATTGAACCTACTTCAACTTCTACACCTGATCTTTCCCTTCACATAAGTCCACCAAGCACTTCCTTTTCCTCTTCTTCGATTTGCAACAACAACAACACATCTGGTGGTGGTGGTGGCATCAATTATGAGGCACGCAATTCAACAAGCACAAATTTCCCTTCACAAGCTCACATTGAGCTTTCTTTGGGAAGGAATTTCAGTGTTGGAGGAGGAAGAGGAGGAGGAGGAGTTCCTGAAGAACCACTACCACACCACAACAACAACATCAACAATAACCCTTATTATCAAACCCAACAGGCTCATTTCCATCATCTTCAACACCATTCTAATGCTTCAAGAGCAACAACAACGACAAGCACTACTACAAGTTCCTCCAATCACATGAGTCACATAAATTATGGGGTTTCTTTGCTTGATGTGTCATCAGAAGGATTGAGGCCAATCAAGGGGATTCCGGTGTATCACAACCGTTCATTCCCTTTCTTGCCCTCGGAACATTCAAGAGACAACAAGGATCATCATGCCAAAATGTGTTTATATCATCACATGCCAACATATCCCTCTTTGTCCTCTTCTTGTTCTCCTCTGTGTTCTTCTTCGTCTTCTTCTTCTTCTCCAGCTGCACCCTACTTCGCCGCTGCTGCCGCGGCGTATAGGGCTGCCACGGCCACAAGGTTTAATGGAATTTCCGGGGAGGCTTTCAAATCTCATCATCCATTGCACCACCATCACTCATCATCACCACACTATGGGGTTGGACTTGGACCCTCTCATGAGACCTCTGCAGGGTTGATGAGATCAAGGTTTTTGCCAAAGTTGCCAGCAAAGAGGAGCATGAGAGCACCGAGAATGCGGTGGACAAGCACACTCCACGCTCGATTTGTCCATGCTGTGGAGCTTCTTGGTGGCCATGAAAGAGCTACACCAAAGTCAGTTCTTGAGCTCATGGATGTGAAGGATCTCACATTAGCTCATGTCAAAAGCCATTTGCAGATGTATCGAACTGTTAAGACCACTGACAAGCCTGCTGCTTCTTCAGGCCTTTCAGATGGATCAGGAGAAGATGACATGTCTCCAATGGGAAGCAGTGGTGGAATGCGTCAATTTTCAGACCAAAGAAGCCTTTCTGATCGACCACTGCAACAAGATATGGACTACTCTTCAGGCAACAACACTCTATGGAGTAACTCTTCAAGCAGTAGAGAAACATGGCAACAAAATAACTCTAATGACGTAGATGGTTTCAGACCCCCAATCTTCCAGTCACAACAAATATCAGGAGGGCATCAAATTCAGGAGTGTGATTCAACCCAACTCAAGAACAGTTTGTCAGGATCAAATTTAGAGTGCAAGAACCCAAGTTTGGAGTTCACATTAGGGAGACCAGATTGGAATGGCAAAGGACAAGCCTAA 1434 0.454 MPLEGIFIEPTSTSTPDLSLHISPPSTSFSSSSICNNNNTSGGGGGINYEARNSTSTNFPSQAHIELSLGRNFSVGGGRGGGGVPEEPLPHHNNNINNNPYYQTQQAHFHHLQHHSNASRATTTTSTTTSSSNHMSHINYGVSLLDVSSEGLRPIKGIPVYHNRSFPFLPSEHSRDNKDHHAKMCLYHHMPTYPSLSSSCSPLCSSSSSSSSPAAPYFAAAAAAYRAATATRFNGISGEAFKSHHPLHHHHSSSPHYGVGLGPSHETSAGLMRSRFLPKLPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGLSDGSGEDDMSPMGSSGGMRQFSDQRSLSDRPLQQDMDYSSGNNTLWSNSSSSRETWQQNNSNDVDGFRPPIFQSQQISGGHQIQECDSTQLKNSLSGSNLECKNPSLEFTLGRPDWNGKGQA 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00405 477 MobiDBLite consensus disorder prediction 113 133 - -
Gma18g00405 477 MobiDBLite consensus disorder prediction 344 438 - -
Gma18g00405 477 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 477 IPR044847 GO:0000976|GO:0006355|GO:0010158
Gma18g00405 477 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 1 477 - -
Gma18g00405 477 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 289 342 IPR006447 GO:0003677
Gma18g00405 477 MobiDBLite consensus disorder prediction 1 37 - -
Gma18g00405 477 MobiDBLite consensus disorder prediction 8 37 - -
Gma18g00405 477 Gene3D - 288 345 - -
Gma18g00405 477 SUPERFAMILY Homeodomain-like 286 342 IPR009057 -
Gma18g00405 477 MobiDBLite consensus disorder prediction 370 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00405 Gma-Chr18 3656004 3661667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00405 153 474 G2-like Transcription Factor Family AT5G16560 47.965 4.31e-75 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma18g00405 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00405 - - gmx:100815360 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00405 18 3656004 3661667 Gma11g02165 11 36727641 36734321 GST