Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00370 ATGGGTTTGTCCCAAGGCCCCTGCACTGATTCCAGGGACCTTTCCAATGCCCCAACCTTAGTTGTAGATCACTACTGTGACTACAACAAGCTCAAATTCCGAACCTTTCTCAGAAAAATGTTCTGGGAATTCGGTCTTGCTTGTGTGGCCAACCCTTCCCGGCGTCGGAGAAGCTCCGAGAGAAGCTCTGCCTATGGAAAAAAGACGAATTTGGAGCACAACAAGGCGTGGCTGCTTGCGGAGTCTGGTGGGTGTGGAGCAGAATTGACCAATGCTGACCCTCAATCGGTTCACTCCTCTTTCAGGTTCAGCTTCTGTTCTCAGGTGGAGTTGGAGTCCTTGAACATGAGTTCTTCAAGTGCTGCAACGGTTTTGATGGTGAATTTGGACAATGGGATGAGTGAATCTCGCGCCAGGGAGATGAAATGGAGGAGAATGGAGTCGTTGGAGAAGAGCATATCCCCTGTGGCTCACAGCTTGATCAGGTTTAGCTATGGTGAAATTATGTCTGCTACTAGGAATTTCTCCAAAGGGAGGGTGTTGGGGAGAGGGGCATTGAGCTGTGTTTTTAGGGGGAGAGTTGGGATTTTGAGGACTGCAGTGGCGATCAAACGATTGGACAAGGAAAGCAAGGAATCTGCCAAGGCCTTTTGTAGAGAATTGATGATTGCAAGTTCTCTTCATAGTTCAAATGTTGTTCCCCTTTTGGGGTTTTGTATTGATCCTGAGGAGGGTTTGTTTTTGGTGTACAAGTATGTTTCAGGGGGCAGTCTGGAGCGCCACTTGCATGGAAGGAAGAAGGGTAGTTCACCTCTTCTGTGGCCTGTGAGGTACAAAGTTGCGATTGGGATTGCTGAAGCTGTAGCTTATCTGCATAGTGGAACTGAAAGATGTGTTGTGCACAGAGACATTAAGCCCTCAAACATTCTGCTTTCTTCAAGGAAGATTCCCAAGCTATGTGACTTCGGATTAGCTACATGGACTTCTGCACCTTCACTTCCTTTCCTTTGCAAAACTGTCAAAGGAACATTTGGatatttggctcctgagtatttccaacatgggaaagtatcagacaagactgatgtatatgcttttggagtggttttgttggaactcattactggccgtaagccaatTGAGGCAAGGAGATCTTCAGGAGAAGAGAACTTGGTCTTATGGGCTAAACCTTTTCTACAGAAGGGGAAAGGAGCAATTGAAGAGTTGCTTGATCCTCAACTCAAGTGCAGTCTTAAATTCTCAAATCAAATGGGTAGAATGATCGAAGCAGCAGCTGCATGTGTCACAAATGAAGAATCTCGGCGACCTGGCATACATGAGATTATTGCAATACTGAAAGGTGAAGAAGAACCTCTTCTCTCCAAAAGAAAGAAGTCCAGTTTTCTTGGGAATGGATGCGTGATTGATTGTTATTCTCAGTTACAACAAACAAATAATGAGATGAAAAGTCACTTGGCATTAGCAATGTCAGGAGTTGCAGAGTTTGAGGATGATGATTATCTCTATGGTCGATAA 1536 0.4238 MGLSQGPCTDSRDLSNAPTLVVDHYCDYNKLKFRTFLRKMFWEFGLACVANPSRRRRSSERSSAYGKKTNLEHNKAWLLAESGGCGAELTNADPQSVHSSFRFSFCSQVELESLNMSSSSAATVLMVNLDNGMSESRAREMKWRRMESLEKSISPVAHSLIRFSYGEIMSATRNFSKGRVLGRGALSCVFRGRVGILRTAVAIKRLDKESKESAKAFCRELMIASSLHSSNVVPLLGFCIDPEEGLFLVYKYVSGGSLERHLHGRKKGSSPLLWPVRYKVAIGIAEAVAYLHSGTERCVVHRDIKPSNILLSSRKIPKLCDFGLATWTSAPSLPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELITGRKPIEARRSSGEENLVLWAKPFLQKGKGAIEELLDPQLKCSLKFSNQMGRMIEAAAACVTNEESRRPGIHEIIAILKGEEEPLLSKRKKSSFLGNGCVIDCYSQLQQTNNEMKSHLALAMSGVAEFEDDDYLYGR 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00370 511 SUPERFAMILY Protein kinase-like (PK-like) 158 458 IPR011009 -
Gma18g00370 511 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1 1 509 - -
Gma18g00370 511 SMART serkin_6 175 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00370 511 Gene3D Phosphorylase Kinase; domain 1 134 252 - -
Gma18g00370 511 Pfam Protein kinase domain 176 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00370 511 ProSiteProfiles Protein kinase domain profile. 175 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00370 511 Gene3D Transferase(Phosphotransferase) domain 1 253 467 - -
Gma18g00370 511 PANTHER OS01G0750732 PROTEIN 1 509 - -
Gma18g00370 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 299 311 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00370 Gma-Chr18 3241807 3245066 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00370 163 489 Trihelix Transcription Factor Family AT1G70460 40.426 4.58e-68 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Gma18g00370 Pkinase 6.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00370 - - gmx:100786826 1019.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00370 18 3241807 3245066 Gma11g02201 11 37231886 37235490 GST
Gma18g00370 18 3241807 3245066 Gma14g02105 14 52135124 52138246 PCT
Gma18g00370 18 3241807 3245066 Gma02g02326 02 49347791 49350670 PCT
Gma14g02105 14 52135124 52138246 Gma18g00370 18 3241807 3245066 PCT
Gma02g02326 02 49347791 49350670 Gma18g00370 18 3241807 3245066 PCT