Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00367 ATGGAGAGTCCCCATTCACTGTCTCCCTCTTCCTCCTCCGACGGCGTCGGCTTCGAGACGGAGGAGCCGCGGACGCCGCTGGCCGTGCGCCGCGCGCTGCAGCTCCTCAACTCCGGCGATCCCGACCTGCGCCTCCAAGCTGCTCGCGACATCCGGCGCCTCACGAAGACGTCACAACGTTGTCGGCGCCAGTTATCCCAGGCTGTCGGTCCACTCGTTTCCATGCTCCGAGTCGACTCGCCCGAGTCACACGAACCCGCTCTCCTCGCCTTGCTCAACCTCGCCGTCAAAGACGAAAAGAATAAAATCAATATTGTGGAGGCCGGTGCATTAGAACCGATAATTAGTTTCCTTAAGTCTCAGAATCTAAATCTGCAGGAGTCTGCAACTGCATCTTTGCTCACTCTATCTGCCTCTTCAACCAACAAACCAATCATTAGTGCTTGTGGTGTCATTCCTCTTCTTGTGCAGATCCTTAGAGATGGAAGCCATCAAGCTAAAGCTGATGCAGTAATGGCTCTCTCTAATTTATCAACACACACTAACAATCTCAGCATCATTCTCGAGACAAACCCAATCCCTTACATGGTTGATCTTCTCAAAACCTGTAAAAAATCCTCAAAAACGGCTGAAAAATGCTGTGCTTTGATAGAATCCTTGGTGGATTATGACGAGGGCAGAACTGCCTTGACATCTGAGGAAGGCGGGGTTCTTGCAGTTGTGGAAGTTCTCGAAAGTGGCACACTCCAAAGTAGGGAGCATGCTGTTGGAGCACTGTTGACAATGTGCCAAAGTGACCGATGTAAATACCGGGAACCAATTCTTAGAGAAGGTGTCATTCCAGGACTTCTTGAGCTTACTGTCCAAGGAACACCGAAGTCTCAGTCAAAAGCACGCACCCTCTTGCAGTTACTGAGAGAGTCTCCTTATCCGAGATCTGAAATTCAACCTGATACCCTTGAGAATATAGTATGCAACATCATATCTCAGATTGATGGCGACGATCAATCTGGTAAGGCAAAGAAGATGCTGGCTGAGATGGTCCAAGTCAGTATGGAACAGAGTCTGAGACATTTACAGCAAAGGGCTCTTGTATGCACCCCAAGTGATCTTCCTATAGCTGGCTGTGCTGCTTCTGAAGTTTCTTCAAAATGA 1155 0.4935 MESPHSLSPSSSSDGVGFETEEPRTPLAVRRALQLLNSGDPDLRLQAARDIRRLTKTSQRCRRQLSQAVGPLVSMLRVDSPESHEPALLALLNLAVKDEKNKINIVEAGALEPIISFLKSQNLNLQESATASLLTLSASSTNKPIISACGVIPLLVQILRDGSHQAKADAVMALSNLSTHTNNLSIILETNPIPYMVDLLKTCKKSSKTAEKCCALIESLVDYDEGRTALTSEEGGVLAVVEVLESGTLQSREHAVGALLTMCQSDRCKYREPILREGVIPGLLELTVQGTPKSQSKARTLLQLLRESPYPRSEIQPDTLENIVCNIISQIDGDDQSGKAKKMLAEMVQVSMEQSLRHLQQRALVCTPSDLPIAGCAASEVSSK 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00367 384 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 10 366 - -
Gma18g00367 384 PANTHER U BOX DOMAIN-CONTAINING 10 366 - -
Gma18g00367 384 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 109 151 IPR000225 GO:0005515
Gma18g00367 384 SMART arm_5 180 222 IPR000225 GO:0005515
Gma18g00367 384 SMART arm_5 139 179 IPR000225 GO:0005515
Gma18g00367 384 SMART arm_5 98 138 IPR000225 GO:0005515
Gma18g00367 384 SMART arm_5 224 264 IPR000225 GO:0005515
Gma18g00367 384 SMART arm_5 57 96 IPR000225 GO:0005515
Gma18g00367 384 Gene3D - 21 184 IPR011989 -
Gma18g00367 384 SUPERFAMILY ARM repeat 30 333 IPR016024 -
Gma18g00367 384 Gene3D - 185 359 IPR011989 -
Gma18g00367 384 MobiDBLite consensus disorder prediction 1 23 - -
Gma18g00367 384 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 150 192 IPR000225 GO:0005515
Gma18g00367 384 MobiDBLite consensus disorder prediction 1 18 - -
Gma18g00367 384 Pfam Armadillo/beta-catenin-like repeat 99 136 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00367 Gma-Chr18 3195760 3199913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00367 29 306 U-box Gene Family AT2G23140 33.929 5.03e-39 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00367 - - gmx:100780954 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00367 18 3195760 3199913 Gma11g02206 11 37295987 37299811 GST
Gma18g00367 18 3195760 3199913 Gma14g00598 14 5821922 5826250 PCT
Gma18g00367 18 3195760 3199913 Gma02g02329 02 49395139 49398856 PCT
Gma14g00598 14 5821922 5826250 Gma18g00367 18 3195760 3199913 PCT
Gma02g02329 02 49395139 49398856 Gma18g00367 18 3195760 3199913 PCT