Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00360 ATGGGTTGCTTCTTTAGTGTACCTTCAAAGATCAAAGCTGAGAGCCCTCCACGTAATGGTTTGAATTCAAAGGATGGTAGCAAAGAAGAGAATGATTTGAGTTGTTTAAGCAGCAAGGTGTCCTCTTCAGCTATGCTTCTAACTCCTCAAAGTGAGGATGAGATATTGCAGGCCAGCAATTTGAAGAACTTCACATTCAATGAGCTAAGAACTGCTACAAGGAACTTTCGTCCGGATAGTATGGTGGGCGAAGGTGGGTTTGGTTGTGTGTTTAAGGGGTGGATCGATGAGCATACACTTGCCCCTACTAAACCAGGGACAGGAATGGTCATTGCTGTGAAGAGGCTTAACCAAGAAAGCAACCAGGGGCACATTGAATGGTTGACAGAAATCAACTACCTGGGGCAGCTCAGTCATCCTAATCTTGTGAAACTAATTGGTTACTCCTTAGAAGATGATCACCGGATTTTGGTGTATGAATTTGTGGCCAAGGGTAGTTTGGATAATCACTTGTTCAGGAGGGGTTCTTACTTTCAACCACTCTCTTGGAACATCCGTATGAAGGTTGCTCTTGATGCTGCTAAGGGTCTTGCATTTCTTCACAGTGATGAAGTAGATGTAATATATAGGGACTTCAAAACTTCCAATATCTTACTTGATTCTAATTATAATGCAAAACTCTCTGATTTTGGGTTGGCAAAAAATGGACCCGAAGGTGATAAGAGCCATGTCTCTACAAGGGTAATGGGCACCTATGGCTATGCAGCTCCTGAGTATATAGCCACAGGTCACCTAACCAAAAAGAGTGACATATACAGTTTTGGAGTTGTTCTTCTGGAACTCATGTCAGGGAAACGTGCACTGGATGACAACAGGCCAAGCGGGGAGCACAGTTTAGTTGAATGGGCCAAACCACTCCTCACCAACAAACACAAGATCTCCCAAGTTATGGATGCTCGCATAGAAGGCCAATACTCAAAGCGCGAAGCAAAGAGAATAGCTCACCTTGCAATTCAATGCCTATCTACAGAACAGAAACTTAGACCAAACATAAATGAGGTGGTGAGATTATTGGAACATCTTCACGATTCCAAAGACACAAGCTCAAGCAGCAATGCTACTCCTAATCCAAGCTTATCTCCTTCTCCTCTTCGTTCATAG 1161 0.4332 MGCFFSVPSKIKAESPPRNGLNSKDGSKEENDLSCLSSKVSSSAMLLTPQSEDEILQASNLKNFTFNELRTATRNFRPDSMVGEGGFGCVFKGWIDEHTLAPTKPGTGMVIAVKRLNQESNQGHIEWLTEINYLGQLSHPNLVKLIGYSLEDDHRILVYEFVAKGSLDNHLFRRGSYFQPLSWNIRMKVALDAAKGLAFLHSDEVDVIYRDFKTSNILLDSNYNAKLSDFGLAKNGPEGDKSHVSTRVMGTYGYAAPEYIATGHLTKKSDIYSFGVVLLELMSGKRALDDNRPSGEHSLVEWAKPLLTNKHKISQVMDARIEGQYSKREAKRIAHLAIQCLSTEQKLRPNINEVVRLLEHLHDSKDTSSSSNATPNPSLSPSPLRS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00360 386 PANTHER KINASE 1B 26 375 - -
Gma18g00360 386 ProSiteProfiles Protein kinase domain profile. 76 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00360 386 MobiDBLite consensus disorder prediction 1 32 - -
Gma18g00360 386 MobiDBLite consensus disorder prediction 363 386 - -
Gma18g00360 386 Pfam Protein tyrosine and serine/threonine kinase 80 358 IPR001245 GO:0004672|GO:0006468
Gma18g00360 386 PANTHER OS01G0588500 PROTEIN-RELATED 26 375 - -
Gma18g00360 386 MobiDBLite consensus disorder prediction 367 386 - -
Gma18g00360 386 Gene3D Phosphorylase Kinase; domain 1 50 161 - -
Gma18g00360 386 SUPERFAMILY Protein kinase-like (PK-like) 52 364 IPR011009 -
Gma18g00360 386 ProSitePatterns Protein kinases ATP-binding region signature. 82 114 IPR017441 GO:0005524
Gma18g00360 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Gma18g00360 386 CDD STKc_IRAK 82 361 - -
Gma18g00360 386 Gene3D Transferase(Phosphotransferase) domain 1 162 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00360 Gma-Chr18 3136080 3140308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00360 62 378 Glycoside Hydrolase AT3G07070 47.205 1.65e-99 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma18g00360 PK_Tyr_Ser-Thr 8.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00360 - - gmx:106795104 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00360 18 3136080 3140308 Gma18g00360 18 3136080 3140308 ECH
Gma18g00360 18 3136080 3140308 Gma11g02214 11 37400470 37404363 GST
Gma18g00360 18 3136080 3140308 Gma14g00590 14 5747394 5750424 PCT
Gma18g00360 18 3136080 3140308 Gma02g02338 02 49462875 49468102 PCT
Gma14g00590 14 5747394 5750424 Gma18g00360 18 3136080 3140308 PCT
Gma02g02338 02 49462875 49468102 Gma18g00360 18 3136080 3140308 PCT