Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00357 ATGAATATTCAAAAAACAATGGCCATGCTCAATATCATCTCCATTCTCTCTCTCTTACTCACTCAATCCCACGCCAAAATACCCGGCGTCTATTCCGGTGGGCCATGGCAAAGCGCTCACGCCACTTTCTACGGTGGCAGCGACGCCTCAGGAACTATGGGAGGAGCGTGTGGGTACGGGAACCTATATTCCCAAGGCTACGGTGTGAACACTGCGGCACTAAGCACTGCTTTGTTCAACAACGGTTTCAGCTGTGGAGCGTGTTTCGAAATCAAATGCACGGATGACCCGAAATGGTGCAACCCCGGTAACCCTTCCATCTTGGTCACCGCCACAAATTTCTGCCCTCCAAACTACGCTCTCCCCACCGACAATGGCGGCTGGTGCAACCCTCCCAGGCCGCACTTCGACCTCGCCATGCCCATGTTCCTCAAAATCGCTCAGTACCGCGCCGGCATCGTCCCCGTCTCTTATCGCCGGGTGGCTTGCAGGAAACAGGGAGGGATGAGGTTCACGATCAACGGCTTCCGTTACTTCAACTTGGTTTTGATCACCAACGTCGCGGGTGCAGGGGATATCATGAGGGCGAGCGTGAAAGGGTCAAAGACAGAGTGGATGAGCATGAGCCGCAACTGGGGGCAGAACTGGCAATCAAACGCGGTTCTGGTTGGTCAGTCACTCTCCTTTAGGGTCACAGGCAGTGACCGACGCACATCCACCTCGTGGAACATTGTCCCACGTAATTGGCAATTTGGCCAAACCTTCGCGGGAAAGAATTTTAGAATCTAA 789 0.5387 MNIQKTMAMLNIISILSLLLTQSHAKIPGVYSGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKCTDDPKWCNPGNPSILVTATNFCPPNYALPTDNGGWCNPPRPHFDLAMPMFLKIAQYRAGIVPVSYRRVACRKQGGMRFTINGFRYFNLVLITNVAGAGDIMRASVKGSKTEWMSMSRNWGQNWQSNAVLVGQSLSFRVTGSDRRTSTSWNIVPRNWQFGQTFAGKNFRI 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00357 262 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 54 168 IPR007112 -
Gma18g00357 262 PANTHER EXPANSIN-A15 11 261 IPR002963 GO:0009664
Gma18g00357 262 SUPERFAMILY PHL pollen allergen 165 256 IPR036749 -
Gma18g00357 262 SMART dpbb_1 71 158 IPR007112 -
Gma18g00357 262 SUPERFAMILY Barwin-like endoglucanases 35 186 IPR036908 -
Gma18g00357 262 PRINTS Expansin signature 66 80 IPR002963 GO:0009664
Gma18g00357 262 PRINTS Expansin signature 93 104 IPR002963 GO:0009664
Gma18g00357 262 PRINTS Expansin signature 107 117 IPR002963 GO:0009664
Gma18g00357 262 PRINTS Expansin signature 126 143 IPR002963 GO:0009664
Gma18g00357 262 PRINTS Expansin signature 143 156 IPR002963 GO:0009664
Gma18g00357 262 PRINTS Expansin signature 167 179 IPR002963 GO:0009664
Gma18g00357 262 PRINTS Expansin signature 179 200 IPR002963 GO:0009664
Gma18g00357 262 PRINTS Expansin signature 214 235 IPR002963 GO:0009664
Gma18g00357 262 PRINTS Expansin signature 243 259 IPR002963 GO:0009664
Gma18g00357 262 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 178 257 IPR007117 -
Gma18g00357 262 PANTHER EXPANSIN-A4 11 261 - -
Gma18g00357 262 PRINTS Expansin/Lol pI family signature 35 50 IPR007118 GO:0005576
Gma18g00357 262 PRINTS Expansin/Lol pI family signature 53 71 IPR007118 GO:0005576
Gma18g00357 262 PRINTS Expansin/Lol pI family signature 75 93 IPR007118 GO:0005576
Gma18g00357 262 PRINTS Expansin/Lol pI family signature 151 167 IPR007118 GO:0005576
Gma18g00357 262 PRINTS Expansin/Lol pI family signature 205 219 IPR007118 GO:0005576
Gma18g00357 262 PRINTS Expansin/Lol pI family signature 243 257 IPR007118 GO:0005576
Gma18g00357 262 Gene3D - 169 260 IPR036749 -
Gma18g00357 262 Pfam Expansin C-terminal domain 169 246 IPR007117 -
Gma18g00357 262 Gene3D - 22 164 IPR036908 -
Gma18g00357 262 Pfam Lytic transglycolase 71 158 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00357 Gma-Chr18 3085445 3087144 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00357 10 262 Expansin Gene Family AT2G39700 82.609 1.75e-161 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00357 - - gmx:100798648 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00357 18 3085445 3087144 Gma11g02218 11 37448228 37450037 ECH
Gma18g01665 18 46708425 46713409 Gma18g00357 18 3085445 3087144 ECH
Gma07g01232 07 16060415 16064554 Gma18g00357 18 3085445 3087144 ECH
Gma11g01259 11 10732993 10735054 Gma18g00357 18 3085445 3087144 ECH
Gma12g00557 12 4664488 4666971 Gma18g00357 18 3085445 3087144 ECH
Gma13g03005 13 44534715 44536116 Gma18g00357 18 3085445 3087144 ECH
Gma18g00357 18 3085445 3087144 Gma18g00357 18 3085445 3087144 ECH
Gma18g00357 18 3085445 3087144 Gma11g02218 11 37448228 37450037 GST
Gma18g00357 18 3085445 3087144 Gma14g00584 14 5690498 5692459 PCT
Gma18g00357 18 3085445 3087144 Gma02g02346 02 49524639 49526505 PCT
Gma14g00584 14 5690498 5692459 Gma18g00357 18 3085445 3087144 PCT
Gma02g02346 02 49524639 49526505 Gma18g00357 18 3085445 3087144 PCT