Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00344 ATGATGGCCAAAACCAAAACACCTGTGCTTGTGCTTCATCTCTGTGTTCTGACCCTTATGGCCACAAACCTTGGAAAATGTCAGCAAGAAGAGTTTTTCTTCAACGGGTTTGGTGGTGGTGGTGCCTCCAACATAACCTTAAACGGAGGAGCAGCGATTGAGCACAAGGGCCTACTTCGTTTAACAAACGACAATCAGAGAGTAATCGGGCACGCGTTTTATCCAACACCAATTCAGTTCAAGCACAAAAACGCCAAAGTTGTATCCTTTTCCACCGCTTTTGCGTTTGCAATCATCCCACAGTACCCAAAACTCGGTGGCCACGGTTTCGCCTTCACCATTTCACGCTCCACATCGCTTAAAGATGCGTACCCTAGCCAGTACTTGGGCCTCCTTAACCCAAACGATGTGGGGAATTTCTCAAACCACTTATTTGCAGTGGAATTCGACACCGTCCAAGACTTCGAATTCGGAGACATCAACGACAACCATGTCGGCATCAACCTCAACAACATGGCATCCAACAAATCCGTGGAAGCTGCGTTTTTTTCCCGAAATAATAAGCAAAACCTCAATTTGAAGAGTGGTGAAGTGACTCAAGCATGGGTTGATTACGATTCCTTAAAAAACAACTTAGAAGTTAGACTCTCCACAACTTCCTCCAAACCCACTTCACCAATTTTGTCATACAAAGTAGATCTCTCACCGATTCTCCAAGATTCCATGTACGTTGGGTTCTCCTCTTCAACAGGGTTACTCGCGAGCTCCCACTACATCCTCGGTTGGAGCTTCAAAACAAACGGAGACGCCAAAACTCTCTCCTTGAAAAACCTCCCTTCGCTCTCCGCCTCCTACAAAGCTCAAAAGCGCTTAATGTTAGCACTGATCATTCCAATTACACTCGCAGCAATTGCTCTAGCATGTTATTACAGAAAGATGAGAAAGACCGAATTGATCGAAGCTTGGGAGATGGAAGTTGTAGGGCCACACAGATTCCCATACAAGGAGCTACACAAAGCTACAAAAGGCTTCAAAGACCAGAACCTCATCGGGTTCGGAGGGTTCGGTCGTGTCTACAAAGGTGTCCTCCCGAAGTCCCACATCGAAGTCGCAGTGAAGCGAGTCTCGCACGAATCAAAACAAGGCATGCAGGAGTTCGTGTCGGAAATCTCAACCATAGGAAGGCTCCGACACAGAAACCTCGTACAGTTACTAGGTTGGTGTCGGAAACAAAACGAGCTATTGTTGGTCTACGATTTCATGCGAAACGGAAGCTTAGACAAATACCTATTCTTCGACCAACCGAGGAGAATACTTAGTTGGGAGCAAAGGTTTAAGATAATAAAAGGTGTGGCTTTAGGGTTAGTTTATTTGCACGAGGAGTGGGAGCAAACGGTGATTCACAGAGACGTGAAAGCGGGGAATGTTTTGTTGGACAACGAGATGAACGGAAGGTTGGGTGATTTTGGTTTGGCCAAGCTTTACGAGCACGGTGCGAACCCTGGCACCACACGTGTGGTGGGAACGCTGGGGTATCTTGCGCCGGAGCTCACACGGACGGGGAAACCAACGACGAGTTCTGATGTTTATGCGTTCGGGGCGTTGGTGTTGGAGGTGGTGTGTGGGAGGAGGCCGATTGAGGTGAAGGCGCAGCCGGAGGAGCTTGTGCTGGTGGAGTGGGTGTGGGAGCGGTGGCGCGTGGGGAACGTGTTGGCGGTGGTGGACCGTAGGTTGGGTGGGGTGTTTGATGAGGTGGAGGCTTTGTTGGTGGTGAAGGTGGGGTTGTTGTGTTCCGCGGAGGCGCCGGAAGAGAGGCCCAGTATGAGGCAGGTGGTGAGGTACATGGAGAGGGAGGTGGCGCCGCCGGAGGTGGGGGATGGGAAGAAAGAAGGTGGCGGGGGAGATGGGGAGTTTAAGGGTTATGTTCATTCGTATTCGACGGCGTCGTTTTTTGACGTGGAGAGTGCATCTGCGTCGTCTCTGTCACTTTCCGGTGGCCGGTAG 2004 0.5005 MMAKTKTPVLVLHLCVLTLMATNLGKCQQEEFFFNGFGGGGASNITLNGGAAIEHKGLLRLTNDNQRVIGHAFYPTPIQFKHKNAKVVSFSTAFAFAIIPQYPKLGGHGFAFTISRSTSLKDAYPSQYLGLLNPNDVGNFSNHLFAVEFDTVQDFEFGDINDNHVGINLNNMASNKSVEAAFFSRNNKQNLNLKSGEVTQAWVDYDSLKNNLEVRLSTTSSKPTSPILSYKVDLSPILQDSMYVGFSSSTGLLASSHYILGWSFKTNGDAKTLSLKNLPSLSASYKAQKRLMLALIIPITLAAIALACYYRKMRKTELIEAWEMEVVGPHRFPYKELHKATKGFKDQNLIGFGGFGRVYKGVLPKSHIEVAVKRVSHESKQGMQEFVSEISTIGRLRHRNLVQLLGWCRKQNELLLVYDFMRNGSLDKYLFFDQPRRILSWEQRFKIIKGVALGLVYLHEEWEQTVIHRDVKAGNVLLDNEMNGRLGDFGLAKLYEHGANPGTTRVVGTLGYLAPELTRTGKPTTSSDVYAFGALVLEVVCGRRPIEVKAQPEELVLVEWVWERWRVGNVLAVVDRRLGGVFDEVEALLVVKVGLLCSAEAPEERPSMRQVVRYMEREVAPPEVGDGKKEGGGGDGEFKGYVHSYSTASFFDVESASASSLSLSGGR 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00344 667 SUPERFAMILY Protein kinase-like (PK-like) 328 617 IPR011009 -
Gma18g00344 667 ProSiteProfiles Protein kinase domain profile. 344 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00344 667 CDD lectin_legume_LecRK_Arcelin_ConA 43 268 IPR001220 GO:0030246
Gma18g00344 667 PANTHER L-TYPE LECTIN-DOMAIN RECEPTOR KINASE IV.2-LIKE PROTEIN 9 667 - -
Gma18g00344 667 Gene3D - 28 283 - -
Gma18g00344 667 Pfam Protein kinase domain 345 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00344 667 Gene3D Transferase(Phosphotransferase) domain 1 421 627 - -
Gma18g00344 667 PANTHER - 9 667 - -
Gma18g00344 667 Pfam Legume lectin domain 30 278 IPR001220 GO:0030246
Gma18g00344 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Gma18g00344 667 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 269 IPR013320 -
Gma18g00344 667 ProSitePatterns Protein kinases ATP-binding region signature. 350 373 IPR017441 GO:0005524
Gma18g00344 667 SMART serkin_6 344 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00344 667 CDD STKc_IRAK 350 617 - -
Gma18g00344 667 Gene3D Phosphorylase Kinase; domain 1 329 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00344 Gma-Chr18 2896926 2898992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00344 30 665 Receptor kinase-like Gene Family AT3G55550 57.727 0.0 745
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gma18g00344 Pkinase 6.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00344 - - gmx:100804136 1241.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00344 18 2896926 2898992 Gma11g02234 11 37665904 37668257 ECH
Gma03g00567 03 15823550 15825868 Gma18g00344 18 2896926 2898992 ECH
Gma01g00999 01 34975564 34979822 Gma18g00344 18 2896926 2898992 ECH
Gma18g01699 18 47561528 47563552 Gma18g00344 18 2896926 2898992 ECH
Gma07g01263 07 16380580 16383944 Gma18g00344 18 2896926 2898992 ECH
Gma18g00344 18 2896926 2898992 Gma18g00344 18 2896926 2898992 ECH
Gma18g00344 18 2896926 2898992 Gma11g02234 11 37665904 37668257 GST