Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00341 ATGGCGAATAGATGGTGGGCTGGGAATGTGGGAATGATAAGAGAGCAAGAGTTGATGGAAaacagcaacaacaacaacaacaacaacaacGCTACTACTACTACACCGACGAATAGCAGCAACAGCAACACTAACGCGAACACCAACACCAACACGACCGAGGAAGAGGTGAGCAGGGATAACGGAGAGGACCAGAACCAAAACCTCGGCAGCCACGAAGGGTCGGAGCCCGGAAGCAGCGGTCGGAGGCCACGTGGCAGGCCAGCGGGGTCCAAGAACAAGCCCAAGCCGCCCATAGTCATAACTAAGGAAAGCCCCAACGCGCTCCGAAGCCACGTCCTGGAAATCGCCTCCGGCAGCGATGTCGCCGAGAGCATCGCCGCCTTCGCCAACCGCCGCCACCGTGGCGTGTCGGTCCTCAGCGGGAGTGGCATTGTAGCCAACGTCACTCTCCGCCAGCCCGCCGCCCCCGCCGGCGTCATAACCCTCCACGGGAGGTTCGAGATACTCTCCCTCTCGGGTGCCTTTTTGCCGTCCCCCTCGCCGTCCGGCGCCACCGGACTGACCGTCTACCTAGCCGGCGGGCAGGGGCAGGTTGTCGGCGGCAACGTGGCGGGCTCTCTCGTCGCCTCCGGACCGGTGATGGTGATCGCCGCCACTTTCGCTAATGCCACTTATGAGAGGTTGCCTCTGGAGGATGATCAAGGTGAGGAGGAAATGCAAGTgcagcagcagcagcagcagcagcaacagcagcagcagcagcagcagcaACAACAATCTCAAGGTTTGGGGGAACAGGTTTCAATGCCTATGTATAATTTGCCTCCTAATTTGCTACACAATGGTCAGAACATGCCTCATGATGTGTTCTGGGGAGCTCCACCTCGCCCTCCTCCTTCCTTCTGA 909 0.5446 MANRWWAGNVGMIREQELMENSNNNNNNNNATTTTPTNSSNSNTNANTNTNTTEEEVSRDNGEDQNQNLGSHEGSEPGSSGRRPRGRPAGSKNKPKPPIVITKESPNALRSHVLEIASGSDVAESIAAFANRRHRGVSVLSGSGIVANVTLRQPAAPAGVITLHGRFEILSLSGAFLPSPSPSGATGLTVYLAGGQGQVVGGNVAGSLVASGPVMVIAATFANATYERLPLEDDQGEEEMQVQQQQQQQQQQQQQQQQQQSQGLGEQVSMPMYNLPPNLLHNGQNMPHDVFWGAPPRPPPSF 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00341 302 MobiDBLite consensus disorder prediction 21 55 - -
Gma18g00341 302 MobiDBLite consensus disorder prediction 234 302 - -
Gma18g00341 302 SUPERFAMILY AF0104/ALDC/Ptd012-like 106 233 - -
Gma18g00341 302 PIRSF ESCAROLA 14 301 IPR014476 GO:0003680
Gma18g00341 302 Pfam Plants and Prokaryotes Conserved (PCC) domain 110 222 IPR005175 -
Gma18g00341 302 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 21 302 IPR014476 GO:0003680
Gma18g00341 302 CDD DUF296 110 221 IPR005175 -
Gma18g00341 302 Gene3D - 109 251 - -
Gma18g00341 302 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 21 302 - -
Gma18g00341 302 Coils Coil 237 262 - -
Gma18g00341 302 MobiDBLite consensus disorder prediction 21 106 - -
Gma18g00341 302 MobiDBLite consensus disorder prediction 240 268 - -
Gma18g00341 302 ProSiteProfiles PPC domain profile profile. 106 243 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00341 Gma-Chr18 2864801 2865871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00341 1 302 AT-hook Motif Nuclear Localized (AHL) Family AT3G55560 54.859 2.08e-82 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00341 - - gmx:100791954 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00341 18 2864801 2865871 Gma18g00341 18 2864801 2865871 ECH
Gma18g00341 18 2864801 2865871 Gma11g02237 11 37691837 37698107 GST