Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00337 ATGAATCACACTCGCTTGGAGTCTTGTCATGAATCTCCCCTTAAAGTATACAAATTCTGTTTTGTCCCAGAAAAACTTGGTGATATGGTTATACTCTTAATAAGGTTTGGCATTCTTGTGTGTCTTGTTGCATCCATATCACTTGCTCTCCACTCAGCATTCTCTAAACCAGACCGGTGGTTCCCGTTACCGGAGCATATTCGCGCCGTCCAGAATACTTCAGTCATTGACAACAGACCAACAAACATCTCACATCTTCAATTTGGCATTGCTGGATCAGCAAACACGTGGCATGGCCGTAGCAACTACACTAAACTATGGTGGGATCCTAACACCACTAGAGGTTATGTTTGGCTTGACAAGAAGCCTAAGATTTTGCACAGTGACATATTAGTACCACCTTATCAAATCTCACGGGGCTGGACTCGGTTCAAGCACGTGCACTCAGCATCTGCTGTTCGGATAGCTCGGATAGTTTATGAGAGCTTTAAACTTGGTTTGCCAAATGTCAGGTGGTTTGTGATGGGAGATGATGATACCGTGTTCTTTACTGAGAACTTGGTTACTGTGTTAGGAAAATATGATCACAATGAAATGTATTATATTGGTGGGAATTCTGAGAGTGTGGAACAAGATGTGATGCATTCTTATAACATGGCATTTGGTGGTGGTGGATTTGCAATCAGTTATGCATTAGCAGCTCAACTAGCCAAAATAATGGATGGTTGTCTAAGTAGATACTTCTATTTTTATGGTTCTGATCAAAGAGTCTGGGCCTGTATTCATGAAATTGGGGTGCCCCTTACCAGAGAAAATGGATTCCACCAGTTTGACATAAGAGGAAATCCATATGGTTTTCTAGCAGCTCACCCCTTGGTACCACTTGTATCACTCCATCACCTTGACCAATTGAGCCCCTTCTTTCCCAACCAGACTCAATTACACTCAATGAAAAAGCTCATCAGTGCATACCACATTGACCCTGCCCGGATAGTGCAGCAAAGTATATGCTATGATCATAAGCGTAGATGGTCAATATCTATTTCATGGGGTTACACTATACAAATCTATACAAAATTGTTGATAGCAGCAGACTTGCAGATGCCATTGCAGACATTTCAGACTTGGCGAAGTTGGAAGGATGGTCCCTTCATATTCAATACTCGACCTATGAGCTCTGACCCGTGCCAGCAGCCAGCTAGGTTTTTCCTGGATCAGGCTACAAAGGTGGGAAAAAGTGGAAGTATCACTATCTACAAGAGACATGAAGGCAAGGAAGCAAAGTGCAACAGAGAAGGCACTAATAATGAGGAAGTGCAAAGAATTAGAGTTTCTGCCTTGAAGCTGGATCCAGAATATTGGAAgaatGTACCCCGTAGGCATTGCTGTCAACTTTTGGGTGGTGGAAGCATAAAGAATGGCAGTATGAATATCAGGATTAAGAAGTGCAGACCTCATGAAACAATTACTATTTAG 1476 0.4228 MNHTRLESCHESPLKVYKFCFVPEKLGDMVILLIRFGILVCLVASISLALHSAFSKPDRWFPLPEHIRAVQNTSVIDNRPTNISHLQFGIAGSANTWHGRSNYTKLWWDPNTTRGYVWLDKKPKILHSDILVPPYQISRGWTRFKHVHSASAVRIARIVYESFKLGLPNVRWFVMGDDDTVFFTENLVTVLGKYDHNEMYYIGGNSESVEQDVMHSYNMAFGGGGFAISYALAAQLAKIMDGCLSRYFYFYGSDQRVWACIHEIGVPLTRENGFHQFDIRGNPYGFLAAHPLVPLVSLHHLDQLSPFFPNQTQLHSMKKLISAYHIDPARIVQQSICYDHKRRWSISISWGYTIQIYTKLLIAADLQMPLQTFQTWRSWKDGPFIFNTRPMSSDPCQQPARFFLDQATKVGKSGSITIYKRHEGKEAKCNREGTNNEEVQRIRVSALKLDPEYWKNVPRRHCCQLLGGGSIKNGSMNIRIKKCRPHETITI 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00337 491 Pfam Protein of unknown function, DUF604 211 463 IPR006740 -
Gma18g00337 491 PANTHER BNAA05G27650D PROTEIN 10 489 - -
Gma18g00337 491 Gene3D - 75 341 - -
Gma18g00337 491 PANTHER FRINGE-RELATED 10 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00337 Gma-Chr18 2822899 2827369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00337 10 489 Glycosyltransferase AT3G11420 55.936 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00337 - - gmx:100802549 1023.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00337 18 2822899 2827369 Gma11g02240 11 37732032 37740224 ECH
Gma01g01013 01 35458052 35462812 Gma18g00337 18 2822899 2827369 ECH
Gma18g01702 18 47593815 47597354 Gma18g00337 18 2822899 2827369 ECH
Gma18g00337 18 2822899 2827369 Gma18g00337 18 2822899 2827369 ECH
Gma18g00337 18 2822899 2827369 Gma11g02240 11 37732032 37740224 GST