LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma18g00327	ATGGCGGAATTGGAGGAGGAGCGGATGGGGGATTTCAAGCCCTTCTCGGAAGGTTCTTCGTGCTCGCGTTCGATCAGCGAAACCGTGAACGGCTCGCACCAATTCACGATAAAGGGTTACTCTTTGGCCAAAGGGATGGGTGCTGGAAAGTACATCATGAGCGACACTTTCACCGTTGGTGGTTACGATTGGGCTATTTACTTCTACCCCGATGGGAAGAACCCTGAGGACAATTCCATGTACGTTTCGGTCTTTATTGCGCTCGCTAGCGACGGAACCGATGTTAGGGCTTTGTTCAAGTTGACGCTGGTGGATCAGAGTGAGAAGGGGAATGATAAAGTTCATAGCCATTTCGATCGCCCTCTCGAGAGTGGACCTTATACCTTGAAGTATAAAGGCAGCATGTGGGGTTACAAACGCTTCTTCAGAAGAACACAACTGGAAACCTCAGAGTATCTAAAAAATGATTGCCTTGTCATGCATTGCACTGTTGGTGTTGTTAAAACTCGTTTTGAGGGATCTAAACAGGGTGTTATTGTGCCACAGTCAGACATGGGCCGGGATTTTAAGGACTTGTTGGAATCTGAGGTCGGTTGTGACATACTTTTCAAGGTCAAAAGTGAAAGCTTCAAAGCTCATAAGTTGATACTTGCAGCCCGATCTCCTGTGTTTAGAGCCCAGTTTTTTGGGCTTGTTGGGGATCCTACCTTAGAGGAAGTAGTGGTAGAGGATATTGAGCCCTTTATCTTCAAGGCAATGCTTCTCTTTGTTTACTCTGACAAACTTCCTGGCATATATGAGGTTATGGACTCAATGCCCTTGTGCTCATACACCGTCATGGTGCAGCATCTCTTGGCTGCTGCTGATCTCTATAATCTTGATCGGCTCAAACTGCTTTGCGAATCAAAATTGTGTGAAGAAATCAATACTGACAATGTGGCCACAACACTTGCGCTGGCAGAGCAACATCACTGTCCACAGCTTAAGGCAATCTGTTTAAAATATATTGCAAATCCTGCAAACTTGGGAGTGATATATTGTTACACCTTGTGCAGCTGTAATGCAGTCAGAAGCTTTTGTGCATTTGAAAGAGAGCTGCCCCTCAATGCTGTTGGAATTGCTGGAGACATTTGCATCAGTGGATGA	1146	0.4572	MAELEEERMGDFKPFSEGSSCSRSISETVNGSHQFTIKGYSLAKGMGAGKYIMSDTFTVGGYDWAIYFYPDGKNPEDNSMYVSVFIALASDGTDVRALFKLTLVDQSEKGNDKVHSHFDRPLESGPYTLKYKGSMWGYKRFFRRTQLETSEYLKNDCLVMHCTVGVVKTRFEGSKQGVIVPQSDMGRDFKDLLESEVGCDILFKVKSESFKAHKLILAARSPVFRAQFFGLVGDPTLEEVVVEDIEPFIFKAMLLFVYSDKLPGIYEVMDSMPLCSYTVMVQHLLAAADLYNLDRLKLLCESKLCEEINTDNVATTLALAEQHHCPQLKAICLKYIANPANLGVIYCYTLCSCNAVRSFCAFERELPLNAVGIAGDICISG	381

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma18g00327	381	PANTHER	BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1	18	345	IPR045005	GO:0016567
	Gma18g00327	381	SUPERFAMILY	TRAF domain-like	27	166	-	-
	Gma18g00327	381	PANTHER	BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 3	18	345	-	-
	Gma18g00327	381	SMART	math_3	35	147	IPR002083	GO:0005515
	Gma18g00327	381	Gene3D	Potassium Channel Kv1.1; Chain A	175	302	IPR011333	-
	Gma18g00327	381	SUPERFAMILY	POZ domain	181	306	IPR011333	-
	Gma18g00327	381	CDD	BTB_POZ_BPM_plant	185	305	-	-
	Gma18g00327	381	MobiDBLite	consensus disorder prediction	1	23	-	-
	Gma18g00327	381	SMART	BTB_4	199	308	IPR000210	GO:0005515
	Gma18g00327	381	Gene3D	Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A	29	169	IPR008974	GO:0005515
	Gma18g00327	381	ProSiteProfiles	BTB domain profile.	199	262	IPR000210	GO:0005515
	Gma18g00327	381	CDD	MATH	31	164	IPR002083	GO:0005515
	Gma18g00327	381	Pfam	BTB/POZ domain	189	306	IPR000210	GO:0005515
	Gma18g00327	381	Gene3D	-	303	346	-	-
	Gma18g00327	381	ProSiteProfiles	MATH/TRAF domain profile.	30	164	IPR002083	GO:0005515

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma18g00327	Gma-Chr18	2720018	2725702	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma18g00327	K10523		-	gmx:100786636	684.871

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma18g00327	18	2720018	2725702	Gma11g02254	11	37858618	37863752	ECH
	Gma03g01899	03	44902240	44906274	Gma18g00327	18	2720018	2725702	ECH
	Gma19g01941	19	48552265	48556472	Gma18g00327	18	2720018	2725702	ECH
	Gma18g00327	18	2720018	2725702	Gma18g00327	18	2720018	2725702	ECH
	Gma18g00327	18	2720018	2725702	Gma11g02254	11	37858618	37863752	GST