Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00326 ATGAATGGCGAGGGGAGTGAAGCAATGCAAGTGGAGAAGGAGAGCTTGGTGTACATGTGGGGTTACCTGCCCGGAGCTCTGCCGCAGAGGACGCCTCTGTTGACGCCGCTTCTTGTTAGGGTTCCGCCCTCTGGTTACTTTTGGAAGGATGTCTGCGGCGGTGGTTGTGGATTCGCCATGGCTATCTCTGAGCCTGGAAAGCTCATAACATGGGGTTCAACAGATGATTTAGGCCAAAGCTATGTTACATCTGGCAAACATGGGGAAACTCCAGAGCCTTTCCCTCTTCCAACTGAAGTGACTATTGTTAAAGCTGCAGCTGGATGGGCACATTGTGTTTCTGTGACGGATTGTGGAGAAGTTTACACATGGGGATGGAGGGAATGTGTACCCTCTGGGAAGGTGTTTGGTGAATCATTAACTGGGGTAAGCCCTGAAAAGGATGTACCCAGAAGGCAAAGTTCATTCTTGACGGAGCAAGTGAGCCCTCGTTCTCAAGGTTCAAAATCTACTGGAGGAACTGCCTCTGGTACCAGTGGAGAAGAAAGTTCAAAGAGAAGAAGAGTATCTTCAGCAAAGCAAACAGCTGAAACCTCATCATCTAGTGATGATACTCAGACTGCATTGCCATGTCTTGTCACACTAAATCCTGGTGTAAGGATAGCAAGTGTAGCTGCTGGTGGTCGCCATACCTTAGCATTGTCAGTTTCAGATATAGGACAGGTGTGGGGTTGGGGCTATGGTGGTGAAGGGCAGCTTGGTTTGGGTTCTAGAATACGAATGGTGTCCTCTCCTCATCTAGTTCCTTGTATTAATTCCTCTTCTTATGGTAAAGATATGGCTCGAGTAAGCATAAGTTCAGATGGGCAAAATTTCAGAGTTCCTGGAAGTTATATTAAGGGAATTGCCTGCGGAGGTCGACACAGTGCAGTAATCACAGATGCTGGAGCTGTTCTTACATTTGGTTGGGGACTTTATGGACAGTGTGGGCAAGGAAGTACAGATGATGAACTGAGCCCGAGTTGCGTATCTTCCTTATTGGGTATTCAAATAGAGGGAGTTGCTGCAGGACTGTGGCATACTGTGTGTACATCTGTGGATGGTGATGTATATGCATTTGGTGGAAACCAGTTTGGACAGCTGGGAACTGGTGGTGATCAAGCTGAGACTATACCGAGGCTCTTGGATTGTCCGAGCTTGGAAAATGTGAATGTAAAGAGGATATCTTGTGGGGCTCGTCACACTGCTCTAATAGCAGATAATGGAAAAGTCTTCTGCTGGGGATGGAACAAGTATGGACAGCTTGGCCTTGGGGACGTGATAGACCGTAACATCCCTTCTGAAGTTACCATCGAAGGTTCAGTATGTGGGGCTGGAGCTGCACTCATCCTTGCCATCATTGCCTTTCTACTCTACAAACGCCACAGGCGCATCAAAGAAGCACAAGCACGGATAGCCAAAGAGCGTGAAGGGATTCTGAATGCCAGTAATGGGGACAGAGCAGCTAAACTTTTCAATGGCAAAGAGATAAAGAAAGCCACAAACGACTTCTCCTGTGATCGGCTTCTCGGTGTTGGAGGCTATGGTGAAGTCTACAAGGGGATTCTTCAAGATGGCACTGTTGTGGCTGTCAAGTGTGCCAAGCTTGGCAACCCCAAAGGCACTGACCAAGTCCTCAATGAGAAAATGGGACCCTTCTTGATCACTTGCAAGGTCAAATGCCTAAGGGCCGTGACTGGCTTACATGGACTCATCGCCTTCAAGTTGCACGACACCGCTGAGGGTCTCGCTTACCTTCACTTCATGGCTGTGCCTCCTATCTACCATAGAGATGTGAAGTCCAGCAACATTCTGCTAGATATCAAGCTGAATGCCAAGGTTTCAGATTTTGGTTTGTCTAGGTTGGCTCGGACAAATATGAGTCATATCTCTACTTGTGCTCAGGGGACCCTTGGGTACCTTGATCTTGAGTATTATAGGAACTACCAATTGATTGATAAGAGTGATGTTTACAGTTTTGGAGTGGTGCTACTTGAGGTTTTGACAGCTCAGAAGGCACTAGATTTTAATAGGGCTGTTGATGATGTGAACTTGGCGGTTTACGTGCATCGGATGGTGACCAAGGAAAAGTTGTTGGATGTCATTGATCCAGTGTTGAAGAtgttggagaaaaggagagacaacacgaaatcacacacactcaaaatgatgagatga 2217 0.4614 MNGEGSEAMQVEKESLVYMWGYLPGALPQRTPLLTPLLVRVPPSGYFWKDVCGGGCGFAMAISEPGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEVTIVKAAAGWAHCVSVTDCGEVYTWGWRECVPSGKVFGESLTGVSPEKDVPRRQSSFLTEQVSPRSQGSKSTGGTASGTSGEESSKRRRVSSAKQTAETSSSSDDTQTALPCLVTLNPGVRIASVAAGGRHTLALSVSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHLVPCINSSSYGKDMARVSISSDGQNFRVPGSYIKGIACGGRHSAVITDAGAVLTFGWGLYGQCGQGSTDDELSPSCVSSLLGIQIEGVAAGLWHTVCTSVDGDVYAFGGNQFGQLGTGGDQAETIPRLLDCPSLENVNVKRISCGARHTALIADNGKVFCWGWNKYGQLGLGDVIDRNIPSEVTIEGSVCGAGAALILAIIAFLLYKRHRRIKEAQARIAKEREGILNASNGDRAAKLFNGKEIKKATNDFSCDRLLGVGGYGEVYKGILQDGTVVAVKCAKLGNPKGTDQVLNEKMGPFLITCKVKCLRAVTGLHGLIAFKLHDTAEGLAYLHFMAVPPIYHRDVKSSNILLDIKLNAKVSDFGLSRLARTNMSHISTCAQGTLGYLDLEYYRNYQLIDKSDVYSFGVVLLEVLTAQKALDFNRAVDDVNLAVYVHRMVTKEKLLDVIDPVLKMLEKRRDNTKSHTLKMMR 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00326 738 SUPERFAMILY Protein kinase-like (PK-like) 502 722 IPR011009 -
Gma18g00326 738 SUPERFAMILY RCC1/BLIP-II 17 451 IPR009091 -
Gma18g00326 738 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 66 118 IPR000408 -
Gma18g00326 738 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 368 421 IPR000408 -
Gma18g00326 738 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 302 312 IPR000408 -
Gma18g00326 738 SMART serkin_6 517 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00326 738 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 422 467 IPR000408 -
Gma18g00326 738 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 408 418 IPR000408 -
Gma18g00326 738 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 10 455 - -
Gma18g00326 738 Pfam Protein kinase domain 589 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00326 738 Gene3D - 148 466 IPR009091 -
Gma18g00326 738 PANTHER REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN 10 455 - -
Gma18g00326 738 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 240 315 IPR000408 -
Gma18g00326 738 MobiDBLite consensus disorder prediction 140 206 - -
Gma18g00326 738 ProSiteProfiles Protein kinase domain profile. 429 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00326 738 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 316 367 IPR000408 -
Gma18g00326 738 Pfam Regulator of chromosome condensation (RCC1) repeat 316 363 IPR000408 -
Gma18g00326 738 Pfam Regulator of chromosome condensation (RCC1) repeat 421 452 IPR000408 -
Gma18g00326 738 Pfam Regulator of chromosome condensation (RCC1) repeat 367 418 IPR000408 -
Gma18g00326 738 Pfam Regulator of chromosome condensation (RCC1) repeat 240 312 IPR000408 -
Gma18g00326 738 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
Gma18g00326 738 ProSitePatterns Protein kinases ATP-binding region signature. 523 545 IPR017441 GO:0005524
Gma18g00326 738 PRINTS Chromosome condensation regulator RCC1 signature 102 115 IPR000408 -
Gma18g00326 738 PRINTS Chromosome condensation regulator RCC1 signature 417 438 IPR000408 -
Gma18g00326 738 PRINTS Chromosome condensation regulator RCC1 signature 357 375 IPR000408 -
Gma18g00326 738 PRINTS Chromosome condensation regulator RCC1 signature 242 256 IPR000408 -
Gma18g00326 738 Gene3D Phosphorylase Kinase; domain 1 492 573 - -
Gma18g00326 738 Gene3D Transferase(Phosphotransferase) domain 1 585 738 - -
Gma18g00326 738 MobiDBLite consensus disorder prediction 154 180 - -
Gma18g00326 738 Gene3D - 8 134 IPR009091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00326 Gma-Chr18 2703345 2713294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00326 462 727 Receptor kinase-like Gene Family AT5G02070 48.220 6.50e-81 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gma18g00326 Pkinase 3.8e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00326 - - gmx:100781488 858.596
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00326 18 2703345 2713294 Gma11g02255 11 37868249 37874616 ECH
Gma18g00326 18 2703345 2713294 Gma18g00326 18 2703345 2713294 ECH
Gma18g00326 18 2703345 2713294 Gma11g02255 11 37868249 37874616 GST
Gma18g00326 18 2703345 2713294 Gma14g00563 14 5405263 5410464 PCT
Gma18g00326 18 2703345 2713294 Gma02g02368 02 49759522 49764761 PCT
Gma14g00563 14 5405263 5410464 Gma18g00326 18 2703345 2713294 PCT
Gma02g02368 02 49759522 49764761 Gma18g00326 18 2703345 2713294 PCT