Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00324 ATGAAGGCACTAATTCTTGTTGGAGGGTTTGGAACAAGGTTGAGGCCATTGACACTCAGTGTTCCCAAGCCTCTTGTTGATTTTGCTAACAAGCCCATGATTCTGCATCAGATAGAAGCTCTCAAGGCCATTGGCGTCAATGAAGTGGTACTAGCTATCAATTACCAACCAGAGGTCATGTTGAATTTCTTGAAGGAGTTTGAGGCAAAACTTGGTATCAAAATCACTTGTTCTCAAGAAACTGAACCGCTAGGTACTGCAGGCCCCTTGGCTCTTGCGAGGGATAAGCTAATAGATGACTCTGGAGAGCCATTTTTTGTTCTCAACAGTGATGTTATCAGTGAGTACCCACTTAAAGAAATGATTGAATTCCACAAAACCCATGGAGGAGAGGCTACCATAATGGTGACAAAgGTCGATGAGCCATCAAAATATGGTGTGGTTGTGATGGAGGAGACTACCGGGCAGGTTGAGAGATTTGTAGAGAAACCAAAGTTGTTTGTTGGCAACAAAATCAATGCTGGAATCTACCTATTGAACCCCTCAGTTTTGGATCGAATTGAACTGAGGCCCACTTCTATCGAGAAAGAGGTGTTTCCAAAGATTGCAGCAGAGAAAAAGCTATATGCAATGGTCCTGCCAGGATTCTGGATGGACATTGGACAACCAAAGGACTATATTTCTGGCCTGACACTTTACCTGGACTCGCTGAGGAAAAAGTCTCCTTCTAAACTGGCCAGTGGTCCTCACTTTGTGGGGAATGTCATTGTGCATGAAACTGCCACTATTGGCGAGGGATGTCTCGTTGGACCTGATGTTGCAATCGGTCCTGGCTGTGTTGTTGAGTCAGGTGTCAGGCTTTCACGCTGCACAGTTATGCGAGGAGTTCGGATTAAAAAGCATACTTGCATATCTAACAGTATCATTGGGTGGCATTCCACTGTTGGGCAATGGGCCCGTGTGGAGAATATGACTATCCTTGGAGAAGATGTCCATGTTTGTGATGAAGTTTATAGCAATGGTGGTGTAGTTTTGCCCCACAAGGAGATCAAGTCAAACATTCTAAAGCCAGAGATTGTCATTAGAACGGGAAGACACTCCCAACACTATGGAGAGCGCCAATAA 1125 0.4471 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAIGVNEVVLAINYQPEVMLNFLKEFEAKLGIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISEYPLKEMIEFHKTHGGEATIMVTKVDEPSKYGVVVMEETTGQVERFVEKPKLFVGNKINAGIYLLNPSVLDRIELRPTSIEKEVFPKIAAEKKLYAMVLPGFWMDIGQPKDYISGLTLYLDSLRKKSPSKLASGPHFVGNVIVHETATIGEGCLVGPDVAIGPGCVVESGVRLSRCTVMRGVRIKKHTCISNSIIGWHSTVGQWARVENMTILGEDVHVCDEVYSNGGVVLPHKEIKSNILKPEIVIRTGRHSQHYGERQ 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00324 374 Pfam Nucleotidyl transferase 2 229 IPR005835 GO:0009058|GO:0016779
Gma18g00324 374 Pfam Bacterial transferase hexapeptide (six repeats) 261 295 IPR001451 -
Gma18g00324 374 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 231 IPR029044 -
Gma18g00324 374 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 1 361 - -
Gma18g00324 374 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE FAMILY PROTEIN-RELATED 1 361 - -
Gma18g00324 374 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1 312 IPR029044 -
Gma18g00324 374 Gene3D Hexapeptide repeat proteins 238 368 - -
Gma18g00324 374 CDD M1P_guanylylT_B_like_N 1 234 IPR045233 GO:0004475|GO:0005525|GO:0009298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00324 Gma-Chr18 2683629 2689019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00324 1 185 Eukaryotic Initiation Factors Gene Family AT4G18300 23.116 7.04e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00324 K00966 - gmx:100818016 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00324 18 2683629 2689019 Gma18g00324 18 2683629 2689019 ECH
Gma18g00324 18 2683629 2689019 Gma11g02260 11 37916693 37918671 GST
Gma18g00324 18 2683629 2689019 Gma14g00562 14 5395016 5398297 PCT
Gma18g00324 18 2683629 2689019 Gma02g02369 02 49771196 49774209 PCT
Gma14g00562 14 5395016 5398297 Gma18g00324 18 2683629 2689019 PCT
Gma02g02369 02 49771196 49774209 Gma18g00324 18 2683629 2689019 PCT