Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00277 ATGTTATGTGCAAAAATGTCTTATTCTTCTTCAGCTTTTCCTTCTGTGGTCTCAAAATGCACCGTTGTCCCTCACCGGAACTCAACTATGGGAGACCTCAAGCTCTCTATCTCCGACCTTAACATGCTCTTATCTCACTACATCCAAAAGGGATGTCTCTTCACCACTCCTTCACTTCCCTCTTCCGCTCTCATCCCTCACCTCAAAAACGCTCTTTCCCAAACCCTCTCTCTCTTCCCTCCCCTCGCCGGCCGTCTCAAAACCGACGCCGACGGATACGTCTACATCACATGCAACGACACCGGCGTCGACTTCATCCACGTCACCGCCGCCGATATCTCCGTCGCAGACCTCCTCTCCCCGTCGTCGTCGTCGTCGTCGTCCGATGTCCCTCCAATCTTCAAACAACTCTTCCCCTTCCACCACAAAATCAGTTACACCGCTCATTCCTCCCCAATCATGGCCTTCCAGGTCACCGACCTCGCCGACGGCATCTTCCTCGGCTGCGCCGTCTGCCACGCCGTCACCGACGGCGCCTCCTTCTGGAACTTCTTCAACACCTTCGCCGGAATCTCAAGAGGAGCCACCACCTCTCCCTCCACCCTCCCGGATTTTCGCCGCGAATCCATCCTCAACTCCAACGTCGTGCTCCGCCTGCCAGAAGAAATCAAGGTGACCTTTAATGTAGAGGAGCCTTTTCGCGAGAGAATCTTCAGCTTCAGCCGCGAATCAATTCAGGAACTGAAAGCTACTGTGAACAATAATGGCTTGACATCGTTTCCGCCGCCGGAGAATGGTGACGCGGTTGAGTTGATGGCGAAGATGAGCAACGACACGCAACCGAAAACGGTGACGACGACAGAGATTTCGTCGTTTCAGTCACTGTGCGCGTTGGTGTGGCGCTGCGTGACCAAGGCGAGGAATATCGAGGGGTCTAAAACGACAACGTTCCGCATGGCAGTTAACGTTCGCCAACGCTTGGAACCCAAGTTGGGGGACTGTTACTTCGGGAACGCGATTCAGAGCATTGCCACGTGTGCAGAAGCTGCTGATGTGGCGTCTAAGGAGCTTCGCTGGTGCGCGGAGCAGCTGAACAAAAGCGTGAAGGCGTTCGATAGTGCTACGGTGCACCGCAACGTGGAAAATTGGGAGCGCCAGCCAAAGTGCTTCGAGCTGGGGAACCACGACGGCGCCACCGTGCAGATGGGAAGCTCGCCGAGGTTTCCGATGTACGACAATGATTTCGGATGGGGGCGGCCCTTGGCCGTGCGCAGCGGCGGAGCGAACAAGTTTGACGGCAAGATGTCGGCGTTTCCCGGGAGGAATGGCGGCGGCGCCGTCGATTTGGAGATGGTTTTGGCGCCGGACACCATGGCGAGACTTGAGTCTGATTCTGAGTTCATGTTTTACGTGTCTGTCGTTGTGCGTGACGAAGACGCGAAATCTCCAGGGGTCAAAAGCAACGACATTGGTAAATGTTCGGCCACGCATGGAGCTCAAGTTGCAAAAGCAGGTAACGTGGCGTCTAAGGAGCTTCGCTGGTGTGCGGAGCAGCTGAACAAAAGCGTGAAGGCGTTCGATAGTGCTACGGTGAACCGCAACGTGGAAAATTGGGAGCGCCAGCCAAAGTGCTTCGAGCTGGGGAACCACGACGGCGCCTCTGTGCAGATGGGAAGCTCGCCGAGGTTTCCGATGTACGACAATGATTTCGGATGGGGGCGGCTCTTGGCCGTGCGCAGCGGCGGAGCGAACAAGTTTGACGGCAAGATGTCGGCGTTTCCCGGGAGGAATGGCGGTGGCACCGTTGATTTGGAGTTGTTTTCGGCGTCGAACAAAATGGCGCGACTCGAGTCTGATTCTGAGTTTGTAGGGACACGTTAG 1881 0.5587 MLCAKMSYSSSAFPSVVSKCTVVPHRNSTMGDLKLSISDLNMLLSHYIQKGCLFTTPSLPSSALIPHLKNALSQTLSLFPPLAGRLKTDADGYVYITCNDTGVDFIHVTAADISVADLLSPSSSSSSSDVPPIFKQLFPFHHKISYTAHSSPIMAFQVTDLADGIFLGCAVCHAVTDGASFWNFFNTFAGISRGATTSPSTLPDFRRESILNSNVVLRLPEEIKVTFNVEEPFRERIFSFSRESIQELKATVNNNGLTSFPPPENGDAVELMAKMSNDTQPKTVTTTEISSFQSLCALVWRCVTKARNIEGSKTTTFRMAVNVRQRLEPKLGDCYFGNAIQSIATCAEAADVASKELRWCAEQLNKSVKAFDSATVHRNVENWERQPKCFELGNHDGATVQMGSSPRFPMYDNDFGWGRPLAVRSGGANKFDGKMSAFPGRNGGGAVDLEMVLAPDTMARLESDSEFMFYVSVVVRDEDAKSPGVKSNDIGKCSATHGAQVAKAGNVASKELRWCAEQLNKSVKAFDSATVNRNVENWERQPKCFELGNHDGASVQMGSSPRFPMYDNDFGWGRLLAVRSGGANKFDGKMSAFPGRNGGGTVDLELFSASNKMARLESDSEFVGTR 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00277 626 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 10 472 - -
Gma18g00277 626 Gene3D - 14 223 IPR023213 -
Gma18g00277 626 Pfam Transferase family 502 622 - -
Gma18g00277 626 Pfam Transferase family 17 468 - -
Gma18g00277 626 Gene3D - 231 466 IPR023213 -
Gma18g00277 626 Gene3D - 467 621 IPR023213 -
Gma18g00277 626 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 499 623 - -
Gma18g00277 626 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 10 472 - -
Gma18g00277 626 SUPERFAMILY CoA-dependent acyltransferases 35 199 - -
Gma18g00277 626 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 499 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00277 Gma-Chr18 2299047 2305681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00277 461 617 Monolignol Biosynthesis Gene Families AT5G48930 26.087 1.79e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00277 - - gmx:100792476 933.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00277 18 2299047 2305681 Gma11g02296 11 38338987 38340562 ECH
Gma18g00277 18 2299047 2305681 Gma18g00277 18 2299047 2305681 ECH
Gma18g00277 18 2299047 2305681 Gma14g00524 14 5004622 5006067 PCT
Gma18g00277 18 2299047 2305681 Gma02g02403 02 50115096 50116939 PCT