Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00275 ATGGAAGAGGGCATGTCAGAGTTTTGTATTAGAGGTGGTAACAGTGGCAGTGCCACTGGCACCAAGTGTGGGCGATGGAATCCCACTACTGAACAGGTTAAGGTTCTGACTGATCTTTTCAGTTCTGGACTCCGCACCCCTAGCACTGATCAGATTCAAAAGATCTCTAATCAGCTTAGTTTTTATGGTAAGATTGAGAGCAAGAACGTGTTCTATTGGTTTCAGAACCATAAGGCTAGGGAGAGACAAAAGCGTCGCAAGGTTGATAACGATGTGATTCGTAGTGAAAACTCTATCTCCATCAATTCTTTTACACAAAATTTTACTCAGCTATATCAGGTTTCTGAGCCCGAGAGGGTGATGGAGACTCTTCAGCTCTTCCCCTTGAACTCCTTTGGTGAATCAGAATCAAAGAATATGAGGGTCCATGCAAGTGATCAATGCAGGGATAACACTATGTTTTCATACACAGTTGGGGAACAAATGGATCATCCACCATTAGATCTTCGCTTGAGTTTTATGTGA 525 0.4286 MEEGMSEFCIRGGNSGSATGTKCGRWNPTTEQVKVLTDLFSSGLRTPSTDQIQKISNQLSFYGKIESKNVFYWFQNHKARERQKRRKVDNDVIRSENSISINSFTQNFTQLYQVSEPERVMETLQLFPLNSFGESESKNMRVHASDQCRDNTMFSYTVGEQMDHPPLDLRLSFM 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00275 174 ProSiteProfiles 'Homeobox' domain profile. 19 84 IPR001356 GO:0003677
Gma18g00275 174 SMART HOX_1 21 88 IPR001356 GO:0003677
Gma18g00275 174 Gene3D - 22 89 - -
Gma18g00275 174 CDD homeodomain 25 85 IPR001356 GO:0003677
Gma18g00275 174 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 163 IPR044555 GO:0003700|GO:0099402
Gma18g00275 174 SUPERFAMILY Homeodomain-like 24 86 IPR009057 -
Gma18g00275 174 PANTHER WUSCHEL-RELATED HOMEOBOX 7 1 163 - -
Gma18g00275 174 Pfam Homeodomain 23 83 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00275 Gma-Chr18 2285415 2286142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00275 10 174 Wox Gene Family AT3G11260 57.865 1.43e-61 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gma18g00275 Homeodomain 3.3e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00275 - - gmx:100791433 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00275 18 2285415 2286142 Gma11g02298 11 38357954 38358743 ECH
Gma18g00275 18 2285415 2286142 Gma18g00275 18 2285415 2286142 ECH
Gma18g00275 18 2285415 2286142 Gma11g02298 11 38357954 38358743 GST
Gma18g00275 18 2285415 2286142 Gma02g02405 02 50128370 50129610 PCT
Gma02g02405 02 50128370 50129610 Gma18g00275 18 2285415 2286142 PCT