Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00233 ATGAGCAAAAACTGGAAATCTAGCTGCTTCAGGGATCCTGGGGGAGTTCTCTTCCTTCTGGCGTTGTGTTTATTGTTTCAGAACTTTAGTTTGTGCTGCTCTTTGAATGAAGAAGGTAAAGCTCTTTTGAAGTTCAAGCATGGAATAGTAAACGACCCTTTTGATGCTTTGTCCAATTGGGTTAATGATGAAGTAGCAGTTAACCCCTGTAATTGGTTTGGAGTTGAGTGTTCTGATGGAAGAGTAGTGGTCTTGAATTTGAAAGACCTTTGTCTTGAAGGAAATCTGGTACCTGAGCTTGCAAACCTTGTTCACATAAAGTCCATAATTTTGCGGAACAATTCTTTTTATGGAATCATCCCTGAAGGAATTGCACACTTGAATGAATTGGAGGTTTTGGATTTGGGCTACAACAACTTCAGTGGACCACTACCTAGAGATCTTGGGAATAATATTTCGTTAACAATCCTTTTGCTGGACAACAATGATCATCTTTGTGGTTTCTCTCCTGAAATTAATGAATTGAAGATGCTTTCTGAATATCAAGTAGATGAAAACCAACTAATCCGTGCAGAAAAAGTGCCAGCTTGTAGAAGATCCATCAAACAGCAATCAAGGCATGTTGGCCAAAATAAAAATGGTGTTCAGAGGCTACTGCAAACTCGTACTCACGAAGGTGGAAGTCCTTTTAATCGTGTTTTTCCTGTTAGTCCTGCTCCATTTCCTTCAGCTCCCCCACCTGCCCCAGCAACGCCACCAGTGGTTCAGAAGCCAGCTCCTGTTGACCGAAATAATTCTGCTTCTCCTTCTCCCCTGCCTGGACCACGATCTGCACCGCTATATAAAAGTAGCTCATCAAAGAACCATGTAGTTGTTATTTTGGCTGGAGTTATGGGTGGTGCTGTATTTCTTCTCATTTCAATCATTGGCCTATATCTCTGTAAAACAAACAAGGTAGCTACTGTAAAACCTTGGGCCACAGGATTAAGCGGACAGCTTCAGAACGCATTTGTAACAGGTGTGCCAAAGCTAAAGAGATCAGAGCTTGAAGCAGCATGTGAAGATTTTAGTAATGTAATTGGTACTTCATCCATTGGTACAGTGTACAAAGGGACTTTATCTAGTGGTGTTGAAATAGCTGTGGCATCTGTTGCAGCGACATCATCCAAAGATTGGTCAAAGACTTTAGAAGCCCAATTTAGGAACAAGATAGATACATTATCAAAAGTGAACCACAAGAATTTTGTAAATCTTCTTGGACATTGTGAAGAAGATGAGCCTTTCACCAGAATGGTGGTTTTTGAGTATGCCCCGAATGGAACACTCTTTGAGCATTTACACATAAAAGAATCTGAGCACTTGGATTGGGGAACAAGACTTAGAATTGCCATGGGCATGGCTTACTGCCTACAACATATGCACCAGTTGGAGCCTCCTTTGGTCCTTAGCAACCTGAATTCTTCAGCTGTCCAACTCACTGATGATTATGCTGCCAAAATCTCTGATTTGAGTTTCTTAAATGAAATAGCTTCAGCTGTGATAAAATCTCCTGCTAGAAAAAACACTGACATGACACCAGCAAGTAACATTTACAGCTTTGGTGTTATATTATTTGAAATGGTAACTGGCAGACTCCCTTATTCAGTGGACAATGATGGCTCACTTGATGACTGGGCTTCACACTATTTACAAGGGGATCAGCCCCTCAAAGAAATGGTGGATCCGACTCTAGCATCCTTCCAAGAAGAACAACTAGAACAAGTCGATGCTTTGATTAAATCTTGTGTCCATCCTGATCAAAAGCAAAGACCAACAATGAAAGAAGTTTGTGTGAGATTAAGAGAGATAACAAAAATAACACCTGATGCAGCTGTTCCAAAGCTTTCTCCACTTTGGTGGGCAGAGCTTGAGATTGCTTCTGTAAATGCAAGCTGA 1935 0.4103 MSKNWKSSCFRDPGGVLFLLALCLLFQNFSLCCSLNEEGKALLKFKHGIVNDPFDALSNWVNDEVAVNPCNWFGVECSDGRVVVLNLKDLCLEGNLVPELANLVHIKSIILRNNSFYGIIPEGIAHLNELEVLDLGYNNFSGPLPRDLGNNISLTILLLDNNDHLCGFSPEINELKMLSEYQVDENQLIRAEKVPACRRSIKQQSRHVGQNKNGVQRLLQTRTHEGGSPFNRVFPVSPAPFPSAPPPAPATPPVVQKPAPVDRNNSASPSPLPGPRSAPLYKSSSSKNHVVVILAGVMGGAVFLLISIIGLYLCKTNKVATVKPWATGLSGQLQNAFVTGVPKLKRSELEAACEDFSNVIGTSSIGTVYKGTLSSGVEIAVASVAATSSKDWSKTLEAQFRNKIDTLSKVNHKNFVNLLGHCEEDEPFTRMVVFEYAPNGTLFEHLHIKESEHLDWGTRLRIAMGMAYCLQHMHQLEPPLVLSNLNSSAVQLTDDYAAKISDLSFLNEIASAVIKSPARKNTDMTPASNIYSFGVILFEMVTGRLPYSVDNDGSLDDWASHYLQGDQPLKEMVDPTLASFQEEQLEQVDALIKSCVHPDQKQRPTMKEVCVRLREITKITPDAAVPKLSPLWWAELEIASVNAS 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00233 644 Gene3D Transferase(Phosphotransferase) domain 1 437 625 - -
Gma18g00233 644 Pfam Leucine rich repeat N-terminal domain 36 78 IPR013210 -
Gma18g00233 644 ProSiteProfiles Protein kinase domain profile. 354 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00233 644 Gene3D Ribonuclease Inhibitor 33 222 IPR032675 -
Gma18g00233 644 Pfam Protein tyrosine and serine/threonine kinase 356 612 IPR001245 GO:0004672|GO:0006468
Gma18g00233 644 PANTHER BNAA09G55080D PROTEIN 1 644 - -
Gma18g00233 644 PANTHER PROTEIN MALE DISCOVERER 2 1 644 - -
Gma18g00233 644 SUPERFAMILY L domain-like 35 189 - -
Gma18g00233 644 SUPERFAMILY Protein kinase-like (PK-like) 337 613 IPR011009 -
Gma18g00233 644 MobiDBLite consensus disorder prediction 225 282 - -
Gma18g00233 644 MobiDBLite consensus disorder prediction 235 256 - -
Gma18g00233 644 Gene3D Phosphorylase Kinase; domain 1 327 436 - -
Gma18g00233 644 Pfam Leucine rich repeat 105 163 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00233 Gma-Chr18 1891511 1896611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00233 18 615 Receptor kinase-like Gene Family AT5G16000 25.600 1.09e-43 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Gma18g00233 PK_Tyr_Ser-Thr 3.8e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00233 - - gmx:100784541 1246.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00233 18 1891511 1896611 Gma18g00233 18 1891511 1896611 ECH
Gma18g00233 18 1891511 1896611 Gma11g02343 11 38844741 38848938 GST
Gma18g00233 18 1891511 1896611 Gma14g00484 14 4591154 4595348 PCT
Gma14g00484 14 4591154 4595348 Gma18g00233 18 1891511 1896611 PCT