Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00231 ATGGCTCCGAACCTTGAATGTCGTATGTACGAAGCGAAGTACCCGGAGGTGGACATGGCAGTGATGATACAGGTGAAGAACATAGCGGACATGGGGGCGTACGTGTCGCTGCTGGAGTACAACAACATCGAGGGCATGATCTTGTTCTCGGAGCTCTCTCGCCGTCGTATTCGGAGTGTGAGCAGCCTCATCAAGGTTGGCCGCATCGAGCCGGTGATGGTGCTCCGTGTCGACAAGGAAAAGGGTTACATCGATCTCAGCAAGCGCAGGGTCTCCGAAGAGGACATCCAGGCCTGCGAGGAGAGGTACAACAAGAGCAAGCTCGTCCACTCCATCATGCGCCACGTCGCTGAAACCCTCAACATCGATTTGGAGGAGCTCTATATTCACATTGGATGGCCTTTGTATCGCAAATATGGTCACGCTTTCGAGGCTTTCAAAATAATTGTGACTGATCCTGATACTGTTTTAAGTACTCTCACTCGTGAAGTTAAGGAAGTTGGCCCTGATGGGCAAGAGGTGACTAGTGTGGTGCCAGCTGTATCAGAAGAAGTGAAGGACTCTCTTGTGAAGAATATTAGAAGACGAATGACCCCCCAACCCTTGAAAATTAGGGCAGATATTGAAATGAAATGTTTTCAATTTGATGGAGTTCTTCACATTAAGGAGGCAATGCGTAAGGCTGAAGCTGTGGGAAATGATGACTGCCCTGTCAAAATTAAACTTGTTGCTCCCCCACTTTATGTTCTTACCACCCAGACACTGGACAAGGAGCAAGGAATATTGGTTCTCAACAATGCCATAGCTTCTTGCACTGAAGCAATAGAACAACACAAGGGTAAACTTGTGGTTAAGGAGGCAGCTAGAGCAGTGAGTGAACGTGATGATAAATTGCTTGCCGAGCACATGGCTAAGCTACGCCAAGATAATGAAGAGGTCAGTGGTGATGAAGACAGTGAGGAGGAAGAAGATACAGGAATGGGCGAGACACTACCAACAATCCAATGGGGACAGAATATCAGGGTTGTTCTTGATGTTGGTTGTGAAGTTGCTAGCTTTGGCGGCTATCTTCTGGACAAAAATGTTATTGCTATGTCATTTGCACCAAAGGATGAGCACGAAGCTCAGATACAATTTGCTTTGGAACGAGGAATTCCTGCAACTCTTTCTGTCATTGGAACCCAAAAGTTGACATTTGCTGACAACGGATTTGATTTGATCCATTGTGCAAGATGCAGGGTGCATTGGGATGCAGATGTGTTTAGGATTCTTAGACCTGGTGGTTTCTTTGCATGGTCTGCCACACCAGTTTATCGGGATGATCAAAGAGATTGGGAAGTATGGAATGCCATGGTGACCGTAACAAAAGCAATGTGCTGGACTGTTGTGGCTAAGACTCTTGATTCATCTGGAATTGGGCTTGTTATATACCAGAAGCCTACCTCATCTTCCTGTTATCAAGAACGCAAAGGGAACACTCCTCCTTTATGTGAAAATAACGATAGAAAAAGTATCTCATCATGGTATGCCAAATTCAGTAGCTGCCTTATACCTCTTCCAGTTGATGGTGAGGGTAATATGCAGAGCTGGTCAATGCCTTGGCCCCAAAGGCTTACCAGTATACCTCCAAGCTTATCCATTGAATCCGATGCTGGTGAGATGTTCTTGAAGGACAGCAAACACTGGTCCGAATTAGTTTCGGACATTTATGGAGATGGTCTTTCTATAAACTGGTCAAGTTCGAACTATAATGGACATGAATGCTGGTTATGCAGGGTGATGAATGTagtacccattgacatgccaaatactcttacaactatatttgacagagggctaataggaatgtaccatgattggtgtgagtccttaaatacatatccttggacttatgaTCTTGTTCATGCTAGCTTTATCTTCAAACATCTTATGCAAAGATGTGACATTGTTGATGTGGTTGTGGAGATAGATCGCATAATGAGACCAGATGGGTATCTCCTGGTTCAGGACTCTATGGAAATAATTCACAAGCTTGGTCCGGTCTTGCGTTCACTTCATTGGTCTGTAACATTGTCTCAAAATCAGTTTCTTGTTGGTAGGAAGAGTTTCTGGCATCCAAGGCCGTAG 2127 0.4307 MAPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRIRSVSSLIKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETLNIDLEELYIHIGWPLYRKYGHAFEAFKIIVTDPDTVLSTLTREVKEVGPDGQEVTSVVPAVSEEVKDSLVKNIRRRMTPQPLKIRADIEMKCFQFDGVLHIKEAMRKAEAVGNDDCPVKIKLVAPPLYVLTTQTLDKEQGILVLNNAIASCTEAIEQHKGKLVVKEAARAVSERDDKLLAEHMAKLRQDNEEVSGDEDSEEEEDTGMGETLPTIQWGQNIRVVLDVGCEVASFGGYLLDKNVIAMSFAPKDEHEAQIQFALERGIPATLSVIGTQKLTFADNGFDLIHCARCRVHWDADVFRILRPGGFFAWSATPVYRDDQRDWEVWNAMVTVTKAMCWTVVAKTLDSSGIGLVIYQKPTSSSCYQERKGNTPPLCENNDRKSISSWYAKFSSCLIPLPVDGEGNMQSWSMPWPQRLTSIPPSLSIESDAGEMFLKDSKHWSELVSDIYGDGLSINWSSSNYNGHECWLCRVMNVVPIDMPNTLTTIFDRGLIGMYHDWCESLNTYPWTYDLVHASFIFKHLMQRCDIVDVVVEIDRIMRPDGYLLVQDSMEIIHKLGPVLRSLHWSVTLSQNQFLVGRKSFWHPRP 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00231 708 Pfam Eukaryotic translation initiation factor 2 alpha subunit 127 257 IPR011488 GO:0003723|GO:0003743
Gma18g00231 708 Gene3D - 3 91 IPR012340 -
Gma18g00231 708 Coils Coil 303 323 - -
Gma18g00231 708 SUPERFAMILY Nucleic acid-binding proteins 8 89 IPR012340 -
Gma18g00231 708 PANTHER PMT16, PUTATIVE-RELATED 329 707 - -
Gma18g00231 708 CDD S1_IF2_alpha 15 90 IPR044126 GO:0003723
Gma18g00231 708 SMART S1_6 16 89 IPR022967 -
Gma18g00231 708 Pfam S1 RNA binding domain 15 89 IPR003029 GO:0003676
Gma18g00231 708 SUPERFAMILY eIF-2-alpha, C-terminal domain 200 316 IPR024055 -
Gma18g00231 708 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 593 677 IPR029063 -
Gma18g00231 708 MobiDBLite consensus disorder prediction 313 327 - -
Gma18g00231 708 Gene3D EIF_2_alpha 202 324 IPR024055 -
Gma18g00231 708 SUPERFAMILY eIF2alpha middle domain-like 91 196 IPR024054 -
Gma18g00231 708 Gene3D Vaccinia Virus protein VP39 335 464 IPR029063 -
Gma18g00231 708 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 329 707 IPR004159 GO:0008168
Gma18g00231 708 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 336 451 IPR029063 -
Gma18g00231 708 Gene3D Translation initiation factor 2; subunit 1; domain 2 92 196 IPR024054 -
Gma18g00231 708 ProSiteProfiles S1 domain profile. 18 89 IPR003029 GO:0003676
Gma18g00231 708 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 327 695 IPR004159 GO:0008168
Gma18g00231 708 MobiDBLite consensus disorder prediction 305 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00231 Gma-Chr18 1871443 1879371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00231 2 340 Eukaryotic Initiation Factors Gene Family AT5G05470 80.588 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00231 K03237 - gmx:100808221 668.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00231 18 1871443 1879371 Gma11g02346 11 38872686 38875869 ECH
Gma18g00231 18 1871443 1879371 Gma18g00231 18 1871443 1879371 ECH
Gma18g00231 18 1871443 1879371 Gma11g02345 11 38865101 38870258 GST
Gma18g00231 18 1871443 1879371 Gma14g00480 14 4569344 4572851 PCT
Gma14g00480 14 4569344 4572851 Gma18g00231 18 1871443 1879371 PCT