Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00218 ATGGTAGTAGCAGTGGAGAAAACCAACCTCACTTCACAATCACAATGCTTCAACCGTGTTTCTGACAAGAAGAAAGAAAGATGCAAGACACACATGAACAACGTTAACCCATGTTGTTTTTTGTTTCTCTTATGTGTGTGGAGCCTTGTTGTGCTCCCCTCATGCGTGAGGCCAGTTTTGTGTGAAGATGAAGGTTGGGATGGAGTGGTTGTGACAGCATCAAACCTCTTAGCACTTGAAGCTTTCAAGCAAGAGTTGGTTGATCCAGAAGGGTTCTTGCGGAGCTGGAATGACAGTGGCTATGGAGCTTGTTCCGGAGGTTGGGTTGGAATCAAGTGTGCTCAGGGACAGGTTATTGTGATCCAGCTTCCTTGGAAGGGTTTGAGGGGTCGAATCACCGACAAAATTGGCCAACTTCAAGGCCTCAGGAAGCTTAGTCTTCATGATAACCAAATTGGTGGTTCAATCCCTTCAACTTTGGGACTTCTTCCCAACCTTAGAGGGGTTCAGTTATTCAACAATAGGCTTACAGGTTCCATACCTCTTTCTTTAGGTTTCTGCCCTTTGCTTCAGTCTCTTGACCTCAGCAACAACTTGCTCACAGGAGCAATCCCTTATAGTCTTGCTAATTCCACTAAGCTTTATTGGCTTAACTTGAGTTTCAACTCCTTCTCTGGTCCTTTACCAGCTAGCCTAACTCACTCATTTTCTCTCACTTTTCTTTCTCTTCAAAATAACAATCTTTCTGGCTCCCTTCCTAACTCTTGGGGTGGGAATTCCAAGAATGGCTTCTTTAGGCTTCAAAATTTGATCCTAGATAATAACTTTTTCACTGGTGACGTTCCTGCTTCTTTGGGTAGCTTAAGAGAGCTCAATGAGATTTCCCTTAGTCATAATAAGTTTAGTGGAGCTATACCAAATGAAATAGGAACCCTTTCTAGGCTTAAGACACTTGACATTTCTAATAATGCCTTGAATGGGAACTTGCCTGCTACCCTCTCTAATTTATCCTCACTTACACTGCTGAATGCAGAGAACAACCTCCTTGACAATCAAATCCCTCAAAGTTTAGGTAGATTGCGTAATCTTTCTGTTCTGATTTTGAGTAGAAACCAATTTAGTGGACATATTCCTTCAAGCATTGCAAACATTTCCTCGCTTAGGCAGCTTGATTTGTCACTGAATAATTTCAGTGGAGAAATTCCAGTCTCCTTCGACAGTCAGCGCAGTCTAAATCTCTTCAATGTTTCCTACAATAGCCTTTCAGGTTCTGTTCCCCCTCTGCTTGCCAAGAAATTTAACTCAAGCTCATTTGTGGGAAATATTCAACTATGTGGGTACAGCCCTTCAACCCCATGTCTTTCCCAAGCTCCATCACAAGGAGTCATTGCCCCACCTCCTGAAGTGTCAAAACATCACCATCATAGGAAGCTAAGCACCAAAGACATAATTCTCATAGTAGCAGGAGTTCTCCTCGTAGTTCTGATTATACTTTGTTGTGTCCTGCTTTTCTGCCTGATCAGAAAGAGATCAACATCTAAGGCCGGGAACGGCCAAGCCACCGAGGGTAGAGCGGCCACTATGAGGACAGAAAAAGGAGTCCCTCCAGTTGCTGCTGGTGATGTTGAAGCAGGTGGGGAGGCTGGAGGGAAACTAGTCCATTTTGATGGACCAATGGCTTTTACAGCTGATGATCTCTTGTGTGCAACAGCTGAGATCATGGGAAAGAGCACCTATGGAACTGTTTATAAGGCTATTTTGGAGGATGGAAGTCAAGTTGCAGTAAAGAGATTGAGGGAAAAGATCACTAAAGGTCATAGAGAATTTGAATCAGAAGTCAGTGTTCTAGGAAAAATTAGACACCCCAATGTTTTGGCTCTGAGGGCCTATTACTTGGGACCCAAAGGGGAAAAGCTTCTGGTTTTTGATTACATGTCTAAAGGAAGTCTTGCTTCTTTCCTACATGGTGGTGGAACTGAAACATTCATTGATTGGCCAACAAGGATGAAAATAGCACAAGACTTGGCCCGTGGCTTGTTCTGCCTTCATTCCCAGGAGAACATCATACATGGGAACCTCACATCCAGCAATGTGTTGCTTGATGAGAATACAAATGCTAAAATTGCAGATTTTGGTCTTTCTCGGTTGATGTCAACTGCTGCTAATTCCAACGTGATAGCTACAGCTGGAGCATTGGGATACCGGGCACCTGAGCTCTCAAAGCTCAAGAAAGCAAACACTAAAACTGATATCTACAGTCTTGGTGTTATCTTGTTAGAACTCCTAACGAGGAAATCACCTGGGGTGCCTATGAATGGACTAGATTTGCCTCAGTGGGTTGCCTCAGTTGTCAAAGAGGAGTGGACAAATGAGGTTTTTGATGCAGACTTGATGAGAGATGCATCCACAGTTGGCGACGAGTTGCTAAACACGTTGAAGCTCGCTTTGCACTGTGTTGATCCTTCTCCATCAGCACGACCAGAAGTTCATCAAGTTCTCCAGCAGCTGGAAGAGATTAGACCAGAGAGATCAGTCACAGCCAGTCCCGGGGACGATATCGTATAG 2565 0.4398 MVVAVEKTNLTSQSQCFNRVSDKKKERCKTHMNNVNPCCFLFLLCVWSLVVLPSCVRPVLCEDEGWDGVVVTASNLLALEAFKQELVDPEGFLRSWNDSGYGACSGGWVGIKCAQGQVIVIQLPWKGLRGRITDKIGQLQGLRKLSLHDNQIGGSIPSTLGLLPNLRGVQLFNNRLTGSIPLSLGFCPLLQSLDLSNNLLTGAIPYSLANSTKLYWLNLSFNSFSGPLPASLTHSFSLTFLSLQNNNLSGSLPNSWGGNSKNGFFRLQNLILDNNFFTGDVPASLGSLRELNEISLSHNKFSGAIPNEIGTLSRLKTLDISNNALNGNLPATLSNLSSLTLLNAENNLLDNQIPQSLGRLRNLSVLILSRNQFSGHIPSSIANISSLRQLDLSLNNFSGEIPVSFDSQRSLNLFNVSYNSLSGSVPPLLAKKFNSSSFVGNIQLCGYSPSTPCLSQAPSQGVIAPPPEVSKHHHHRKLSTKDIILIVAGVLLVVLIILCCVLLFCLIRKRSTSKAGNGQATEGRAATMRTEKGVPPVAAGDVEAGGEAGGKLVHFDGPMAFTADDLLCATAEIMGKSTYGTVYKAILEDGSQVAVKRLREKITKGHREFESEVSVLGKIRHPNVLALRAYYLGPKGEKLLVFDYMSKGSLASFLHGGGTETFIDWPTRMKIAQDLARGLFCLHSQENIIHGNLTSSNVLLDENTNAKIADFGLSRLMSTAANSNVIATAGALGYRAPELSKLKKANTKTDIYSLGVILLELLTRKSPGVPMNGLDLPQWVASVVKEEWTNEVFDADLMRDASTVGDELLNTLKLALHCVDPSPSARPEVHQVLQQLEEIRPERSVTASPGDDIV 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00218 854 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 22 847 - -
Gma18g00218 854 Pfam Leucine rich repeat N-terminal domain 76 113 IPR013210 -
Gma18g00218 854 PRINTS Leucine-rich repeat signature 190 203 - -
Gma18g00218 854 PRINTS Leucine-rich repeat signature 312 325 - -
Gma18g00218 854 SUPERFAMILY Protein kinase-like (PK-like) 572 841 IPR011009 -
Gma18g00218 854 ProSiteProfiles Protein kinase domain profile. 568 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g00218 854 Gene3D Transferase(Phosphotransferase) domain 1 646 850 - -
Gma18g00218 854 Gene3D Ribonuclease Inhibitor 74 233 IPR032675 -
Gma18g00218 854 Pfam Protein tyrosine and serine/threonine kinase 571 836 IPR001245 GO:0004672|GO:0006468
Gma18g00218 854 SUPERFAMILY L domain-like 112 449 - -
Gma18g00218 854 CDD STKc_IRAK 574 839 - -
Gma18g00218 854 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 22 847 - -
Gma18g00218 854 Gene3D Phosphorylase Kinase; domain 1 574 645 - -
Gma18g00218 854 Pfam Leucine rich repeat 266 325 IPR001611 GO:0005515
Gma18g00218 854 Gene3D Ribonuclease Inhibitor 329 455 IPR032675 -
Gma18g00218 854 Gene3D Ribonuclease Inhibitor 234 328 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00218 Gma-Chr18 1743190 1745965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00218 66 841 Receptor kinase-like Gene Family AT3G51740 64.010 0.0 949
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma18g00218 PK_Tyr_Ser-Thr 1.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00218 - - gmx:547641 1581.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00218 18 1743190 1745965 Gma11g02357 11 38973015 38975875 ECH
Gma18g00218 18 1743190 1745965 Gma18g00218 18 1743190 1745965 ECH
Gma18g00218 18 1743190 1745965 Gma11g02357 11 38973015 38975875 GST
Gma18g00218 18 1743190 1745965 Gma14g00470 14 4433081 4435654 PCT
Gma14g00470 14 4433081 4435654 Gma18g00218 18 1743190 1745965 PCT