Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00205 ATGGTTTCTAGAGAGCAAAAGAGAGCAACACTGAATGAGAAGCTGCAACTTCTTCGTTCTATAACCAACTCTAATGCTCTAGACAAAACCTCGATCATAATAGATGCATCAAAGTATATCGAAGAGTTAAAGGAAAAAGTAGAAAGACTGAACCAAGACGTAGCCAACGCACAAACTTCCAGTGACCAAAATACTTTGCCTATGGTTACAGTAGAAACCTTAGAGAAGGGATTTCTTATAAATGTTTTTTCAGCAAAGAGCTGCCCCGGTCTGCTTGTTTCCATATTGGAGTCATTTGAAGAGATGGGTCTTCATGTGCTTGAAGCTAGGGTTACTTGTAAGGACACCTTTCGATTTCATGCTGTTGGAGGAAAAAATGAAGAACAAGGTGATGAGGACATTGATGCACAAGCTGTGAAACAGGCAATGGGACAAGCAATAAAGAACTGGAGCCAAAATGCTGACCAAAAGTAA 474 0.4008 MVSREQKRATLNEKLQLLRSITNSNALDKTSIIIDASKYIEELKEKVERLNQDVANAQTSSDQNTLPMVTVETLEKGFLINVFSAKSCPGLLVSILESFEEMGLHVLEARVTCKDTFRFHAVGGKNEEQGDEDIDAQAVKQAMGQAIKNWSQNADQK 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00205 157 Gene3D - 3 66 IPR036638 GO:0046983
Gma18g00205 157 PANTHER TRANSCRIPTION FACTOR SCREAM-LIKE PROTEIN 1 155 - -
Gma18g00205 157 Coils Coil 33 60 - -
Gma18g00205 157 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 6 60 IPR036638 GO:0046983
Gma18g00205 157 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00205 Gma-Chr18 1651755 1653216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00205 11 143 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 31.034 6.63e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00205 - - gmx:100813030 305.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00205 18 1651755 1653216 Gma11g02370 11 39083596 39085073 ECH
Gma03g00322 03 5022576 5024360 Gma18g00205 18 1651755 1653216 ECH
Gma01g01329 01 46582158 46584335 Gma18g00205 18 1651755 1653216 ECH
Gma18g01949 18 52703996 52705362 Gma18g00205 18 1651755 1653216 ECH
Gma11g01817 11 20827860 20831725 Gma18g00205 18 1651755 1653216 ECH
Gma18g00205 18 1651755 1653216 Gma18g00205 18 1651755 1653216 ECH
Gma18g00205 18 1651755 1653216 Gma11g02370 11 39083596 39085073 GST
Gma18g00205 18 1651755 1653216 Gma14g00453 14 4342475 4344045 PCT
Gma14g00453 14 4342475 4344045 Gma18g00205 18 1651755 1653216 PCT