Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00204 ATGGATTGTTGTGTGTGTACAACTATGCCATTGATATTGAGGCCTCCGAGGAATACAATATGTGGGGCTTGTTATGAAGGAGTTAGGAGCATAATCAACATGATGAGCAATGTCGAAAGTGAGAAAGTAAAAGCAATGGCTAATCCAAATCCAAACAGTTCTCCAGTTTCGCGGCGAAATTCGAGTAAGACACTTGATGATTGTATAAGATGGTGCTCAGAGCAGATGGAGCAGTTTAATCAACAAAAAGAAGACTTGGTTTTTCTCAGAGGCTTTGTTTCAGCCTTCAAAGCACAGATTCACACGGATATATTGGTCAGTCCAGGCAGGCATGGTCCACCTATACCTGCACATAAGTCCGTTTTGGGAGCAAGATCAGAAATATTTAAGAACATGCTAGAGTGTGATGAATGCAAGGCAGCACCAAGTAACAGCATAACTATACCCGATTTGAACCATGAAGAACTAGAGTCTCTCCTTGAGTTTCTGTACAGTGGGACCTTGGGTGTGGAAAAATTGGAGAAACATGTTTACGCTTTGTCACAAGCAGCTGATAAGTATGTGATCCCACATTTGCTGAAACACTGCGAACGATATCTGCTGAGTTCACTAAGCACTTCCAATGCCCTTGAGACATTGGAGATCGCGGATACTTGTTCCAACCACAACTTGAAGGAGACAACCTTGAATTTCTTAGTTAAAAACATTGAGCACATGGTGCCTTCACCTAAGTTTGAAACTTTTGTGCATAGGAGTCCACATCTTACTGTTCAACTAGTTACAAGGGCGTTTGTGAATGGTGCCAAATAA 810 0.4185 MDCCVCTTMPLILRPPRNTICGACYEGVRSIINMMSNVESEKVKAMANPNPNSSPVSRRNSSKTLDDCIRWCSEQMEQFNQQKEDLVFLRGFVSAFKAQIHTDILVSPGRHGPPIPAHKSVLGARSEIFKNMLECDECKAAPSNSITIPDLNHEELESLLEFLYSGTLGVEKLEKHVYALSQAADKYVIPHLLKHCERYLLSSLSTSNALETLEIADTCSNHNLKETTLNFLVKNIEHMVPSPKFETFVHRSPHLTVQLVTRAFVNGAK 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00204 269 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED 1 268 - -
Gma18g00204 269 SUPERFAMILY POZ domain 88 203 IPR011333 -
Gma18g00204 269 Gene3D Potassium Channel Kv1.1; Chain A 70 204 IPR011333 -
Gma18g00204 269 ProSiteProfiles BTB domain profile. 102 172 IPR000210 GO:0005515
Gma18g00204 269 SMART BTB_4 102 204 IPR000210 GO:0005515
Gma18g00204 269 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 1 268 IPR044784 -
Gma18g00204 269 Pfam BTB/POZ domain 99 203 IPR000210 GO:0005515
Gma18g00204 269 Gene3D - 205 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00204 Gma-Chr18 1646228 1648066 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Gma18g00204 BTB 1e-19 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00204 K10523 - gmx:100777561 529.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00204 18 1646228 1648066 Gma18g00204 18 1646228 1648066 ECH
Gma18g00204 18 1646228 1648066 Gma11g02371 11 39089412 39091462 GST