Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00173 ATGTGTTGGAGCTCTAGTAACTCAGAGGTGGTTGCTTCAAACAAAACCACGTTAGAAGAGGTTTTGGACATTGAGAACAACATGGCTCATCAGTGGGTGCTCAATGCTCCAGAGCCACCTTCCATGCTGCGTCAGGTGGTGGACAACGTCAAGGAAACCCTCTTACCGCATCCAAATCCAAACACATTCTCTTATCTCAGGAACCAACCCTTTTCCAAACGTGCCTTTGCCTTGTTGCAAAATTTGTTTCCCATTCTTGCTTCACTCCAAAACTACAATGCCCAAAAGCTCAAGTGCGATTTAATGGCCGGTCTAACCCTTGCAATCTTCGCTATTCCCCAGTGTATGGGAAATGCGACTTTGGCGCGGCTAAGTCCTGAATATGGCCTATATACAGGAATTGTCCCACCTCTTATTTATGCCATGCTGGCGAGTTCAAGGGAGATAGTGATCGGACCTGGATCCGTGGATTCACTGCTACTTTCCTCAATGATTCAAACATTGAAAGTTCCTATTCATGATTCTAGTACTTACATCCAACTTGTTTTCACTGTGACTTTTTTTGCGGGCATTTTTCAAGTTGCTTTCGGGCTCTTTAGGTTTGGTTTTCTGGTGGAATATCTTTCACAAGCCACGATCGTGGGGTTCTTGGCAGCAGCTGCCGTGGGCATTGGACTACAACAACTGAAAGGATTATTTGGGATCGATAATTTTAACAATAAAACTGATTTGTTTTCCGTGGTGAAATCTCTTTGGACATCGTTCAAAAACCAATCAGCATGGCATCCCTACAATTTAATTATTGGATTCTCATTTCTCTGTTTCATCCTATTTACCAGATTCCTGGGGAAAAGGAACAAGAAACTGATGTGGTTGTCACACGTTGCTCCTCTCCTTTCTGTTATTGGATCATCTGCTATTGCATACAAAATAAACTTTAATGAGCTTCAAGTGAAGGACTACAAAGTTGCAGTCTTGGGACCAATTAAAGGAGGCAGCTTGAATCCAAGTTCACTCCATCAGTTAACATTTGATAGCCAAGTTGTGGGTCATTTGATCAGAATAGGGTTGACGATTGCTATTATTTCACTCACGGGATCCATTGCTGTTGGCCGATCATTTGCATCTCTAAAAGGACACAGTATTGATCCCAATAGAGAAGTGGTATCATTGGGCATAATGAACATTGTTGGATCCTTAACTTCTTGCTATATTGCATCAGGGTCTTTGTCACGTACTGCTGTGAACTATAATGCTGGATCTGAAACCATGGTCTCCATCATAGTGATGGCACTTACGGTGCTGATGTCACTTAAATTTTTGACGGGGCTTTTATATTTCACTCCGAAAGCAATCCTTGCAGCAATAATTCTCTCGGCCGTACCGGGACTGATTGACCTTAACAAAGCACGTGAAATTTGGAAGGTTGATAAAATGGATTTCCTTGCTTGCACTGGAGCCTTTTTGGGAGTCTTGTTTGCATCTGTGGAAATAGGCCTTGCAATTGGGATCGCGATATCATTTGCGAAGATAATTATAACCTCTATTCAACCTGCTATAGCGGTTATTGGAAGGCTTCCAGGAACGGCTGCATTCGGCGATGTTGAACAATATCCAATGGCGGTCAACATTCCTGGGGTTTTGATAGTCTCTTTAAAATCTTCTTGGCTTTGTTTTGCAAATGCAAATCTTGTAGAGGAAAGGATTGAGAGATGGGTGAACAATGCAAAAGCTAAGGATGGCAAAGGAGGAGAAAACACCTTCATACACGTCATTATTGATGCCTCAAGTCTTACAAATATTGACACTGTGGGAATTGCTTCTCTGGTGGAGCTCAACAAAAATTTGATTTCCAGTGGAGTAAAGTTAGCTATCGCTAACCCTAGGTGGCATGTAATTCACAAGCTAAGATTAGCTAACTTCGTGAGCAAAATTGGAGGAAGGGTTTTCCTTTCTGTAGGAGAAGCAGTAGATGCATGTGTTGGCACTAAAATGGTTGCTGTATAA 2007 0.422 MCWSSSNSEVVASNKTTLEEVLDIENNMAHQWVLNAPEPPSMLRQVVDNVKETLLPHPNPNTFSYLRNQPFSKRAFALLQNLFPILASLQNYNAQKLKCDLMAGLTLAIFAIPQCMGNATLARLSPEYGLYTGIVPPLIYAMLASSREIVIGPGSVDSLLLSSMIQTLKVPIHDSSTYIQLVFTVTFFAGIFQVAFGLFRFGFLVEYLSQATIVGFLAAAAVGIGLQQLKGLFGIDNFNNKTDLFSVVKSLWTSFKNQSAWHPYNLIIGFSFLCFILFTRFLGKRNKKLMWLSHVAPLLSVIGSSAIAYKINFNELQVKDYKVAVLGPIKGGSLNPSSLHQLTFDSQVVGHLIRIGLTIAIISLTGSIAVGRSFASLKGHSIDPNREVVSLGIMNIVGSLTSCYIASGSLSRTAVNYNAGSETMVSIIVMALTVLMSLKFLTGLLYFTPKAILAAIILSAVPGLIDLNKAREIWKVDKMDFLACTGAFLGVLFASVEIGLAIGIAISFAKIIITSIQPAIAVIGRLPGTAAFGDVEQYPMAVNIPGVLIVSLKSSWLCFANANLVEERIERWVNNAKAKDGKGGENTFIHVIIDASSLTNIDTVGIASLVELNKNLISSGVKLAIANPRWHVIHKLRLANFVSKIGGRVFLSVGEAVDACVGTKMVAV 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00173 668 PANTHER SULFATE TRANSPORTER 16 667 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gma18g00173 668 SUPERFAMILY SpoIIaa-like 544 660 IPR036513 -
Gma18g00173 668 Gene3D STAS domain 517 662 IPR036513 -
Gma18g00173 668 Pfam Sulfate permease family 97 485 IPR011547 GO:0016021
Gma18g00173 668 CDD STAS_SulP_like_sulfate_transporter 538 651 - -
Gma18g00173 668 TIGRFAM sulP: sulfate permease 84 653 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gma18g00173 668 ProSiteProfiles STAS domain profile. 557 660 IPR002645 -
Gma18g00173 668 Pfam STAS domain 538 656 IPR002645 -
Gma18g00173 668 ProSitePatterns SLC26A transporters signature. 126 147 IPR018045 GO:0008271|GO:0008272
Gma18g00173 668 PANTHER EARLY NODULIN-70 16 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00173 Gma-Chr18 1419649 1427308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00173 31 665 Inorganic Solute Cotransporters AT5G10180 54.160 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00173 K17469 - gmx:100817841 1187.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00173 18 1419649 1427308 Gma11g02401 11 39386695 39394129 GST