Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00167 ATGGCAACAGTTATGGACATGTACAATACTAGTAGCGTCATGATACCAGATTTCTTAGACCAGTGTAGTGATCAAGAGCTGATGAAAGCACTTGAGCCTTTTATGAAAAGTGATTCTTCTAGCATTACATACCCTTCATTCTCTTCCTTTTCTTCTTCTCCCAATTTCTCTTCAACAACAAGCTACGAGCAAAAGGTTTCAATAACTCCAAACCATGCTAGTTCCATCAAACTGAACCAACTCACCCCATCACAGATGTTTCAAATTCAAGCCCGAATCCAGGTTCCACGAGGCCAGTTTCTGAGCCCAAAGCCCATTCCCATGAAGCACGTGCGGGCTTCTCCTTCTTCAAAGCCCACGAAGCTTTACCGTGGGGTGAGGCAGAGACACTGGGGCAAGTGGGTCGCTGAGATCAGACTCCCCAAGAACCGAACACGTCTCTGGCTAGGTACATTTGACACCGCAGAGGAAGCAGCGTTGGCTTACGACAACGCAGCGTTTAAGCTAAGAGGAGAAAACGCGAGGCTCAACTTCCCTCACCTGCGTCACCATGGAGCACGCGCGTACGGTGAGTTTGGGAACTACAAGCCTCTCCCCTCTGCGGTCGATGCGAAGCTTCAAGCCATTTGTCAAAGCTTGGGGACCAATTCGCAGAAACTCAAAACTCAAAACCCTATTGTTCTAGATACACACAAGGCAGAGACAGAGACATCGGAGTTTCAGGATTTTAATAAGGTTGAGAATTACCAAACATCATCGTCCTCGGCCTTCTCCGATGAATATTCTTCTTCTTCTTCTTCTTCTTCACCTGAATCCGATATTACCCTCTTGGATTTCTCGGATTCTTGTGAAACAATGGACAATCTTGGGTTGGACTTGGAGAAGTACCCTTCCGTGGAGATTGATTGGGCAGCTTTATCTGACTCATGA 930 0.4677 MATVMDMYNTSSVMIPDFLDQCSDQELMKALEPFMKSDSSSITYPSFSSFSSSPNFSSTTSYEQKVSITPNHASSIKLNQLTPSQMFQIQARIQVPRGQFLSPKPIPMKHVRASPSSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDNAAFKLRGENARLNFPHLRHHGARAYGEFGNYKPLPSAVDAKLQAICQSLGTNSQKLKTQNPIVLDTHKAETETSEFQDFNKVENYQTSSSSAFSDEYSSSSSSSSPESDITLLDFSDSCETMDNLGLDLEKYPSVEIDWAALSDS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00167 309 Pfam AP2 domain 123 172 IPR001471 GO:0003700|GO:0006355
Gma18g00167 309 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-4 1 305 - -
Gma18g00167 309 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 305 - -
Gma18g00167 309 PRINTS Ethylene responsive element binding protein signature 123 134 IPR001471 GO:0003700|GO:0006355
Gma18g00167 309 PRINTS Ethylene responsive element binding protein signature 145 161 IPR001471 GO:0003700|GO:0006355
Gma18g00167 309 ProSiteProfiles AP2/ERF domain profile. 122 179 IPR001471 GO:0003700|GO:0006355
Gma18g00167 309 CDD AP2 121 181 IPR001471 GO:0003700|GO:0006355
Gma18g00167 309 Gene3D AP2/ERF domain 122 180 IPR036955 GO:0003700|GO:0006355
Gma18g00167 309 SUPERFAMILY DNA-binding domain 122 180 IPR016177 GO:0003677
Gma18g00167 309 MobiDBLite consensus disorder prediction 255 275 - -
Gma18g00167 309 SMART rav1_2 122 185 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00167 Gma-Chr18 1356193 1357756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00167 25 307 AP2-EREBP Transcription Factor Family AT4G39780 51.027 9.51e-77 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma18g00167 AP2 2.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00167 K09286 - gmx:106796800 554.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00167 18 1356193 1357756 Gma11g02408 11 39447281 39448900 GST