Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00166 ATGACGCAGCAGAATGTGGTAGTGTCTGATACTAAATCCGGAGTTTCCTTAACGGTTTTTCCAACAACAACACAAAAGCCACCGGCGGCGCCAGGAGGGTACATTTCCATTCCGAGGAGGAGGGTTTTGAAGAACCTTGAAATCAATGGAGGCCAAAGAATCAATGCATGGGTTGAGTCCATGAGAGCCTCCTCTCCTACCCATCATAAATCCACACCTTTGTCTCAGGAGCATAACTCTTGGATTCTTCACCATCCATCAGCATTAGACATGTTTGACCAAATTATTGACGCGTCAAAGGGAAAACAAATTGTCATGTTTCTGGACTATGATGGCACGCTGTCTCCTATAGTCGACGACCCTGACCGTGCTTTCATGTCTGATTCGATGAGAAAAACAGTGAGGAAACTTGCTAGGTGTTTCCCTACTGCTATAGTGACCGGCAGATGCAAAGACAAGGTTTACAATTTTGTTCGATTGGCAGAGCTATATTATGCAGGAAGCCATGGCATGGATATTAAAGGACCAACAAGAAGCTCCAAATACAACAAAGATAGCAAAGCTGAGGCAATCCTTTGTCAACCTGCCAGTGATTTTCTTCCCTTGATAGATGAGGTGTATCAACAATTAGTTGAAAAGACAAAATCAACTCCTGGAGCTCTGGTTGAGAACAACAAGTTCTGTCTTTCAGTCCATTTTCGTTGCGTTGATGAAAAGAAATGGAGTGAACTGGCACGCCAAGTGAAATCAGTTTTAAAGGAGTACCCGAAGCTTCGACTTACCCAAGGAAGAAAGGTGCTAGAGATTCGTCCCACTATTAAATGGGACAAAGGGAAAGCCTTGGAATTTTTATTAGAGTCACTAGGTTTGGCCAATTGTAGTGATGTCTTTCCTGTTTATATTGGCGATGATCGATCCGATGAAGATGCTTTCAAGAAATTAAGAGACAGAGGACAAGGTTTTGGCATTCTTGTCTCCAAATTTCCGAAAGACACAAGTGCATCTTACTCTTTGCAAGAACCCAACGAGGTGATGAACTTTCTTCAACGCTTGGTGGAGTGGAAACATGTGTCCCTGGGAGCACGTTCCCGAGTGTAA 1098 0.4353 MTQQNVVVSDTKSGVSLTVFPTTTQKPPAAPGGYISIPRRRVLKNLEINGGQRINAWVESMRASSPTHHKSTPLSQEHNSWILHHPSALDMFDQIIDASKGKQIVMFLDYDGTLSPIVDDPDRAFMSDSMRKTVRKLARCFPTAIVTGRCKDKVYNFVRLAELYYAGSHGMDIKGPTRSSKYNKDSKAEAILCQPASDFLPLIDEVYQQLVEKTKSTPGALVENNKFCLSVHFRCVDEKKWSELARQVKSVLKEYPKLRLTQGRKVLEIRPTIKWDKGKALEFLLESLGLANCSDVFPVYIGDDRSDEDAFKKLRDRGQGFGILVSKFPKDTSASYSLQEPNEVMNFLQRLVEWKHVSLGARSRV 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00166 365 CDD HAD_TPP 105 346 - -
Gma18g00166 365 Pfam Trehalose-phosphatase 107 341 IPR003337 GO:0003824|GO:0005992
Gma18g00166 365 SUPERFAMILY HAD-like 105 354 IPR036412 -
Gma18g00166 365 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 364 - -
Gma18g00166 365 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 364 IPR044651 GO:0004805|GO:0005992
Gma18g00166 365 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 106 317 IPR006379 -
Gma18g00166 365 Gene3D - 204 361 IPR023214 -
Gma18g00166 365 Gene3D - 104 203 IPR023214 -
Gma18g00166 365 TIGRFAM T6PP: trehalose-phosphatase 102 352 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00166 Gma-Chr18 1336680 1339854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00166 95 358 Trehalose Biosynthesis Gene Families AT1G06410 26.316 8.79e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00166 K01087 - gmx:100815357 737.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00166 18 1336680 1339854 Gma11g02409 11 39469594 39472751 GST