Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00148 ATGGGTAGTAGCAGTAGGAGGTGTTTGAGCTTCACCACTTGGCGTGACCGGTACTTGCGGTATTCCTTCTCCCGGGCCGGACTCAAATCCACAACCACCGATCTCGGCGACGGCACCATCATGCATTGTTGGGCCCCCAAGGCCCATAACCACTCCACCACTTCCCTTCTTCTCATCCACGGCATCGGAGCCAACGCCACGTGGCAGTGGAACCACTTCATCTCCCCCCTCACGCGCCACTTCAACGTATACGTCCCCGACCTGCTCTTCTTCGGAGATTCCCACACGACACGACCCGAGAGGTCGGAGTGGTTCCAAGCGAAGTGCGTGATGGCTCTGCTGGAGGCTCTAGGGGTCCGCCAAACAAGCGTGGTGGGGCTGAGCTACGGCGGCTTTGTGGCGTATGCTGTGGCGGCGATGTTCCCGGAGAGGGTGGAGAAGGTGGTGGTGTGTTGTGCTGGCGTGTGCTTGGAGGACAGGGACATGGAGGATGAGGGAATGTTTTGGGTTAAAAGTGTTGACGAGGTTGTTAGTGTTTTGCTGCCGCAGACACCGCAGAAGGTTAGGGAACTGCTGCAGCTTACCTTCGCCAACCCTATCAAACTCTTGCCAACTTGTTTTCTCAAAGATTTCATTCATGTGATGTGTACAGAGTACCGGCAGGAGAGGACAGAACTAATTCAAGCATTGCATAAGGATAGAAAACTGTCTAATCTTCCTAAGATAACCAAGCCTATTCAAATTATCTGGGGAGAGCAGGACCAGGTATTCCCACTGGAGTTAGCTCACAGACTGAAGAGGCACGTAGGAGAGAAGGCACAACTTGTAGTCATTACGAATGCAGGGCATGCAATCAATGTAGAGAAGCCTAATGAGCTGTGCAAGAATTTAAAATCCTTCCTCATTGATCCATCCAAGCAAGAAAATCACAGCAATGGTCTAAAGGTTGACCCTCAGAAGCAGAAAAACTTTTCAGCATTGTGGATATGTGAATATTCCTATACTACCCTTTGTTGGTCCCGAGGGACGGAGGAGGCTAGGTTAGCCGAAAGATGGTTATCGGTTCAAGGACGCAAGGTGCCCCTGCTTTTTCAGGAGTGCTCCATTTCCTACAACACTGTAACCTCATCCTCCAATTCCCACACCCACTCCTTCCCACAACACTGTAGCATAGCAGCAGTGGCTAAGCTAACAGGATTTCATCGAGAAATTTTGTATTTTTTGGCATATTATCTTGCTGAAAATATATTAGATGGCCATTGCACCTTTTGGAACAATGTTACAAGCAGGATAAGGTTTATGGTTGCCCCATGTTCGAGCTTTTTTTCTTGTCATTCCTTGCATGCACTATTTGACAAAGGTTCATCGCAAACTTTGCAACATCGCAGGGGATCGAGGTTAATAGTTAGAGCAGATGCAGATTACTATTCTGTACTCGGGGTGTCAAGAAATTCCAGTAAATCTGAAATTAAGAATGCTTATCGGAAGCTTGCCCGGAGTTATCATCCTGATGTGAACAAAGAACCTGATGCAGAACAGAAATTTAAAGAACTTAGTAATGCATATGAGGTCTTGTCAGATGATGAGAAACGATCCATATATGACACATATGGAGAGGCTGGACTTAAGGGTTCAGGAATGGACATGGGGGATTTCAGCAATCCTTTTGACCTGTTTGAGACACTGTTTGAGGGCATGGGTGGCATGGGGGGAAGCAGAGGATCTTGGAATGGAGCAGTTGAGGGCGAGGATGAGTATTACAGTCTTGTTTTGAACTTCAAAGAAGCCATTTTTGGGGTGGAAAAAGAGATAGAGATTCGGCGATTAGAGAGCTGTGGAACCTGCAATGGTTTGGgggctaaaccagggactaaatcatccaagtgtagcacttgtggtggtcagggtcgggttgtcacgtcgacaaggactccattaggcatctttcagcagtccatgacatgctcttcttgcagtggaactggagaaacttcaacaccttgcagcacatgtgctggggaaggtcgagtgagaaagacaaagcggaTAAGTCTCAAGGTTCCTGCTGGTGTGGATTCTGGCAGCCGTTTAAGGGTCCGAAATGAAGGTAATGCTGGAAGGCGTGGGGGTTCTCCCGGTGACCTCTTTGTTGTTCTTGAAGTTATCCCTGACCCCGTGCTTAAGCGAGATGACACAAACATTTTATACACATGCAAGGTGTCTTATATTGATGCAATATTGGGGACAACAATTAAGGTTCCTACTGTGGACGGCATGGTGGATTTAAAAATCCCAGCTGGGACTCAACCAAGCTCAACACTTGTTATGGCTAAGAAAGGTGTTCCCTTGCTGAATAAAAAGAATATGAGGGGTGATCAATTGGTTCGGGTGCAAGTTGAAATCCCCAAAAAACTGAGCAAAGAAGAGAGAAAACTTATTGAGGAACTAGCTGATTTAAGCAAAGGCAAGACTGCTGCCACCAGTAGGAGATAA 2493 0.436 MGSSSRRCLSFTTWRDRYLRYSFSRAGLKSTTTDLGDGTIMHCWAPKAHNHSTTSLLLIHGIGANATWQWNHFISPLTRHFNVYVPDLLFFGDSHTTRPERSEWFQAKCVMALLEALGVRQTSVVGLSYGGFVAYAVAAMFPERVEKVVVCCAGVCLEDRDMEDEGMFWVKSVDEVVSVLLPQTPQKVRELLQLTFANPIKLLPTCFLKDFIHVMCTEYRQERTELIQALHKDRKLSNLPKITKPIQIIWGEQDQVFPLELAHRLKRHVGEKAQLVVITNAGHAINVEKPNELCKNLKSFLIDPSKQENHSNGLKVDPQKQKNFSALWICEYSYTTLCWSRGTEEARLAERWLSVQGRKVPLLFQECSISYNTVTSSSNSHTHSFPQHCSIAAVAKLTGFHREILYFLAYYLAENILDGHCTFWNNVTSRIRFMVAPCSSFFSCHSLHALFDKGSSQTLQHRRGSRLIVRADADYYSVLGVSRNSSKSEIKNAYRKLARSYHPDVNKEPDAEQKFKELSNAYEVLSDDEKRSIYDTYGEAGLKGSGMDMGDFSNPFDLFETLFEGMGGMGGSRGSWNGAVEGEDEYYSLVLNFKEAIFGVEKEIEIRRLESCGTCNGLGAKPGTKSSKCSTCGGQGRVVTSTRTPLGIFQQSMTCSSCSGTGETSTPCSTCAGEGRVRKTKRISLKVPAGVDSGSRLRVRNEGNAGRRGGSPGDLFVVLEVIPDPVLKRDDTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPSSTLVMAKKGVPLLNKKNMRGDQLVRVQVEIPKKLSKEERKLIEELADLSKGKTAATSRR 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00148 830 PRINTS Alpha/beta hydrolase fold signature 138 151 IPR000073 -
Gma18g00148 830 PRINTS Alpha/beta hydrolase fold signature 80 95 IPR000073 -
Gma18g00148 830 PRINTS Alpha/beta hydrolase fold signature 246 260 IPR000073 -
Gma18g00148 830 PRINTS Alpha/beta hydrolase fold signature 124 137 IPR000073 -
Gma18g00148 830 PRINTS DnaJ domain signature 494 509 IPR001623 -
Gma18g00148 830 PRINTS DnaJ domain signature 530 549 IPR001623 -
Gma18g00148 830 PRINTS DnaJ domain signature 510 530 IPR001623 -
Gma18g00148 830 PRINTS DnaJ domain signature 476 494 IPR001623 -
Gma18g00148 830 ProSiteProfiles dnaJ domain profile. 474 538 IPR001623 -
Gma18g00148 830 Pfam DnaJ central domain 612 675 IPR001305 GO:0031072|GO:0051082
Gma18g00148 830 ProSiteProfiles Zinc finger CR-type profile. 599 680 IPR001305 GO:0031072|GO:0051082
Gma18g00148 830 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 417 829 - -
Gma18g00148 830 PANTHER BNAA01G34580D PROTEIN 417 829 - -
Gma18g00148 830 SUPERFAMILY HSP40/DnaJ peptide-binding domain 727 813 IPR008971 GO:0006457|GO:0051082
Gma18g00148 830 Gene3D - 582 717 - -
Gma18g00148 830 PRINTS Epoxide hydrolase signature 138 151 IPR000639 GO:0003824
Gma18g00148 830 PRINTS Epoxide hydrolase signature 244 260 IPR000639 GO:0003824
Gma18g00148 830 PRINTS Epoxide hydrolase signature 80 95 IPR000639 GO:0003824
Gma18g00148 830 PRINTS Epoxide hydrolase signature 278 300 IPR000639 GO:0003824
Gma18g00148 830 CDD DnaJ 474 527 IPR001623 -
Gma18g00148 830 SMART dnaj_3 473 530 IPR001623 -
Gma18g00148 830 CDD DnaJ_zf 612 675 IPR001305 GO:0031072|GO:0051082
Gma18g00148 830 Gene3D - 722 830 - -
Gma18g00148 830 Gene3D DnaJ domain 471 574 IPR036869 -
Gma18g00148 830 Pfam alpha/beta hydrolase fold 55 174 IPR000073 -
Gma18g00148 830 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 599 679 IPR036410 -
Gma18g00148 830 Hamap Chaperone protein DnaJ [dnaJ]. 471 825 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Gma18g00148 830 Pfam DnaJ C terminal domain 587 802 IPR002939 -
Gma18g00148 830 Gene3D - 612 675 - -
Gma18g00148 830 CDD DnaJ_C 583 805 - -
Gma18g00148 830 SUPERFAMILY Chaperone J-domain 471 574 IPR036869 -
Gma18g00148 830 ProSitePatterns Nt-dnaJ domain signature. 515 534 IPR018253 -
Gma18g00148 830 Gene3D alpha/beta hydrolase 16 307 IPR029058 -
Gma18g00148 830 SUPERFAMILY alpha/beta-Hydrolases 28 301 IPR029058 -
Gma18g00148 830 Pfam DnaJ domain 474 535 IPR001623 -
Gma18g00148 830 SUPERFAMILY HSP40/DnaJ peptide-binding domain 580 733 IPR008971 GO:0006457|GO:0051082
Gma18g00148 830 TIGRFAM DnaJ_bact: chaperone protein DnaJ 474 818 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00148 Gma-Chr18 1177926 1186780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00148 475 537 C2H2 Transcription Factor Family AT1G74250 44.928 6.08e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00148 K03686 - gmx:100793352 785.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00148 18 1177926 1186780 Gma11g02426 11 39625228 39629893 GST