Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00137 ATGAAGAGACTTAGCAGCTCAGATTCTTCCAGTGCCCTCATGACAATTTGTCCATCAACAGAGGAACATAGTCCGAGGAACAGCCAACACATGTATGGTAGGGAGTTCCAATCGATGTTGGACGGACTCGACGAGGAAGGGTGTGTTGAAGAACCGGGGTATCAATCTGAGAAGAAGCGTCGTCTAAGTGTGGATCAAGTGAAGGCTTTGGAGAAGAACTTTGAGGTTGAAAACAAGCTTGAACCTGAGAGGAAGGTGAAGCTTGCCCAAGAACTTGGGTTGCAACCTAGACAGGTAGCCGTATGGTTCCAAAACCGTCGAGCCAGATGGAAAACCAAACAATTGGAGAGAGATTATGGTGTACTCAAAGCCAATTATGATGCTCTTAAGCTTAACTTTGACACCCTCGATCAGGACAACGAAGCCTTACGAAAGCAGGTTAAGGAATTGAAATCGAGGCTGCTGCAAGAAGAGAACACAGGAGGAAGCGGTGTTTCGGTGAAGGAAGAGATAATAACGAGGCCTGCAGACTCAGAAGACAAAACGATGGAACAAAGTAAGAGTGACCCATCTTCTGAAACCTCAAATATTAATCCTAGTTCGGAGTCGGAGGAGGATCACTTGAACTACGAGTGTTTCAACAACAACGACGACTGCGTCGGAGGAACCGCCGCATCGCTTTTGCAAGTGGACTTCAAAGACGGTTCTTCCGACAGCGACGGATCAAGCGCGATTTTGAACGAAGACAACATGTACTCTCCCTTGAAATTCAACAATTGCTCCATATCAACCTCGCCGTCATCGTCTTCGATGATGAACTGTTTTCAGTTCCAGAAACCGTATCATCACCACGCGCAGTACGTGAAGATGGAGGAGCACAATTTCCTCAGCGCGGATGAGGCCTGCAATTTCTTCTCGGATGAACAAGCACCGACCCTTCAATGGTACTGTCCAGAACAGTGGAGCTGA 969 0.4737 MKRLSSSDSSSALMTICPSTEEHSPRNSQHMYGREFQSMLDGLDEEGCVEEPGYQSEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDALKLNFDTLDQDNEALRKQVKELKSRLLQEENTGGSGVSVKEEIITRPADSEDKTMEQSKSDPSSETSNINPSSESEEDHLNYECFNNNDDCVGGTAASLLQVDFKDGSSDSDGSSAILNEDNMYSPLKFNNCSISTSPSSSSMMNCFQFQKPYHHHAQYVKMEEHNFLSADEACNFFSDEQAPTLQWYCPEQWS 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00137 322 PRINTS Lambda-repressor HTH signature 84 93 IPR000047 GO:0003677
Gma18g00137 322 PRINTS Lambda-repressor HTH signature 93 109 IPR000047 GO:0003677
Gma18g00137 322 Pfam Homeodomain 58 111 IPR001356 GO:0003677
Gma18g00137 322 MobiDBLite consensus disorder prediction 188 203 - -
Gma18g00137 322 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 250 IPR045224 GO:0003700
Gma18g00137 322 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 253 314 IPR045224 GO:0003700
Gma18g00137 322 MobiDBLite consensus disorder prediction 154 206 - -
Gma18g00137 322 Coils Coil 112 160 - -
Gma18g00137 322 SMART HOX_1 56 117 IPR001356 GO:0003677
Gma18g00137 322 Gene3D - 20 114 - -
Gma18g00137 322 SUPERFAMILY Homeodomain-like 38 115 IPR009057 -
Gma18g00137 322 ProSitePatterns 'Homeobox' domain signature. 88 111 IPR017970 GO:0000981|GO:0006355
Gma18g00137 322 MobiDBLite consensus disorder prediction 172 187 - -
Gma18g00137 322 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-6-LIKE 1 250 - -
Gma18g00137 322 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-6-LIKE 253 314 - -
Gma18g00137 322 CDD homeodomain 58 114 IPR001356 GO:0003677
Gma18g00137 322 ProSiteProfiles 'Homeobox' domain profile. 53 113 IPR001356 GO:0003677
Gma18g00137 322 Pfam Homeobox associated leucine zipper 113 154 IPR003106 GO:0006355|GO:0043565
Gma18g00137 322 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00137 Gma-Chr18 1067762 1070457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00137 1 316 Homeobox Transcription Factor Family AT2G22430 48.961 1.51e-77 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Gma18g00137 Homeodomain 2.7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00137 K09338 - gmx:100777924 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00137 18 1067762 1070457 Gma11g02438 11 39729730 39732360 GST
Gma05g01741 05 39037549 39039873 Gma18g00137 18 1067762 1070457 PCT
Gma08g01227 08 10410795 10412122 Gma18g00137 18 1067762 1070457 PCT