Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00134 ATGATGAATTTCCATCCTAGAAATCTATTTCACCAGTACCTTGGTTCAAGTGATGCTACCATGAGAAGGAGAACCAATTGTAGTCCAATACCTTCGCCTCTTCACCAACCAGTCCCACTTTCAATTCCGTGGGTTCCTGCCATCAATGATAGAGATCACATGTATCTAAACCTTGCACCTATCATTATAATTGTCATAGCTGGCACAACTTGCATAATTTTTTTTCTCATCACCTTGTTCAAAATCCTAAAGTACTATTATCCAAATAGATACAACGTTAGCAGAAGTAACCCACCAATATTATTTGACATTCGTGGAGATTCTCCCTTTTCTGATGATGAGGAACATGATCAAGCCATTAGGCACCCCATATGGTTCATCCCCACAGAGGGTCTCCAACAATCAATCATAGACTCCATCACAGTCTGCAAATACAGAAAAGATGAAGGGTTGGTTAAAGAAACTGAGTGTCTTGTTTGCCTTGGTGAGTTTCAACAAGAAGAGAGTCTCAGAGTATTGCCAAAGTGTAACCACGCTTTTCACATCCCTTGCATTGATACTTGGTTGAGATCTCATAAAAGTTGTCCCTTGTGCCGTGCCCCTATTGTTCTTGATGTTGCTAGTGTTGGTGGTGGCACCGAGTCTGACTCAAATGTTTCTGATATGAACGAATACGTAGAAGAAAGTAATAGTGGTGGAGTGAGGGTTGGAGATGAAGAAAATTCTAGTGAAGAGGGGAGGGATGATGGAATTCATGTTTTGAATGAATGTGTCGAGGTGAGTGGCCATTCTTCAATTCTAATTGGTTCTGCTTCTGATGTTAGTGCACAAGAATTTGATGATGAAATTGAACTCAAAATGAAGAGATCTGTCTCGGTGGATTCATCTTCTGCTTCAATAGTATTTAGTGATGTGTTGGAATTAAATTTTGATATAGAAAGCTTAGACACCAACACCAACTTGGTGGTTGAAAAGGTTTCAATTTCAAGTAACAAGGATGTTGCTATTGCTAAGGAGGGTAGCGAAAGTTCAACCAATAACAAACTGGCTTCAGTTGGGCATGCAATGCAAGAGAGGCATTGCTCATTGAGGTTCTCTTCACATAACACAAAATTCTTATTTTCCAAGCGTAGCAGGAGCCAGAGTTTAACTCTTCCATTGTGA 1164 0.4003 MMNFHPRNLFHQYLGSSDATMRRRTNCSPIPSPLHQPVPLSIPWVPAINDRDHMYLNLAPIIIIVIAGTTCIIFFLITLFKILKYYYPNRYNVSRSNPPILFDIRGDSPFSDDEEHDQAIRHPIWFIPTEGLQQSIIDSITVCKYRKDEGLVKETECLVCLGEFQQEESLRVLPKCNHAFHIPCIDTWLRSHKSCPLCRAPIVLDVASVGGGTESDSNVSDMNEYVEESNSGGVRVGDEENSSEEGRDDGIHVLNECVEVSGHSSILIGSASDVSAQEFDDEIELKMKRSVSVDSSSASIVFSDVLELNFDIESLDTNTNLVVEKVSISSNKDVAIAKEGSESSTNNKLASVGHAMQERHCSLRFSSHNTKFLFSKRSRSQSLTLPL 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00134 387 CDD mRING-H2-C3H2C2D_ZSWM2 156 199 - -
Gma18g00134 387 SMART ring_2 157 198 IPR001841 -
Gma18g00134 387 ProSiteProfiles Zinc finger RING-type profile. 157 199 IPR001841 -
Gma18g00134 387 Pfam Ring finger domain 156 199 IPR001841 -
Gma18g00134 387 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 132 205 IPR013083 -
Gma18g00134 387 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 22 378 IPR044675 -
Gma18g00134 387 MobiDBLite consensus disorder prediction 227 247 - -
Gma18g00134 387 SUPERFAMILY RING/U-box 147 205 - -
Gma18g00134 387 PANTHER RING-H2 FINGER PROTEIN ATL54 22 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00134 Gma-Chr18 1034203 1035541 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00134 58 266 C3H Transcription Factor Family AT1G72220 35.169 3.08e-41 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00134 - - gmx:102667611 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g01739 05 39005535 39007143 Gma18g00134 18 1034203 1035541 PCT