Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00118 ATGTATGCGTTAAGATACAATAAGGAATGGCCTAGTGCTGGATCTGATGATCTTGGAGTTTGGCCACTTCCTCAGACTCCACGAGGCTCCATCAGAACCTATTATTCAAGTCAACCCACCAAAGATTTTCTCTTCAAGAGGGACAAGTTGGCCTTCTTTGACAAGGAGTGTTCCAGAATTGCTGAGCACATATACTTGGGGAGTGACACAGTAGCCAAGAACCATGAACTCCTCAGGCAGAATGGAATCACATACATGCTCAACTGTGTTGGGTTTGTTTGTCCCGCGTATTTCAAAGGTGATTTTGTGTACAAGACACTGTGGTTGCAGGACAGCCCCACGGAGGACATCACAAGCATTCTCTATGATGTGTTTGATTACTTTGAGGATGTCAGAGAGCAAGGTGGGCGTGTCCTTGTTCATTGCTGCCAAGGGGTTTCTCGATCAACGGCTTTGGTGATTGCTTACCTCATGTGGAGGGAGGGGCAGAGCTTTGAAGATGCTTTTCAGTTTGTGAAGACTGCAAGGGCTGTGACCAACCCGAACATGGGTTTTGCTTGTCAACTTTTGCAGTGCCAGAAAAGGATCCATGCTATGCCTACAAGTCCAAATTCTGTTCACAAGATGTATCGGATGGCTCCTCACTCCCCCTATGACCCTCTTCATCTGGTCCCCAAGATGGTTAACCAGCCAGCCTTTCAGATGATACGTTATGAGGGTGCAAAGGGTCCTATTTTGACCATCCATGAAGGTGAAGAACCTCCTGGGTTTTGGACTGCTCTTTCAGGTGATTCTGACAAAGAAGAAGAGGTCATGGTCATGGAGGAACCCTCTGAAGGCATGGAAAGTGCTGAGCTGGTTGATTCGGGGACTACTGGTCCAAGAAAAGTTGATGCATAA 900 0.4711 MYALRYNKEWPSAGSDDLGVWPLPQTPRGSIRTYYSSQPTKDFLFKRDKLAFFDKECSRIAEHIYLGSDTVAKNHELLRQNGITYMLNCVGFVCPAYFKGDFVYKTLWLQDSPTEDITSILYDVFDYFEDVREQGGRVLVHCCQGVSRSTALVIAYLMWREGQSFEDAFQFVKTARAVTNPNMGFACQLLQCQKRIHAMPTSPNSVHKMYRMAPHSPYDPLHLVPKMVNQPAFQMIRYEGAKGPILTIHEGEEPPGFWTALSGDSDKEEEVMVMEEPSEGMESAELVDSGTTGPRKVDA 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00118 299 CDD DSP 57 191 - -
Gma18g00118 299 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 5 231 - -
Gma18g00118 299 Pfam Dual specificity phosphatase, catalytic domain 64 194 IPR000340 GO:0008138|GO:0016311
Gma18g00118 299 PANTHER MKPA PROTEIN 232 270 - -
Gma18g00118 299 SMART dsp_5 56 195 IPR020422 GO:0006470|GO:0008138
Gma18g00118 299 ProSiteProfiles Dual specificity protein phosphatase domain profile. 56 198 IPR020422 GO:0006470|GO:0008138
Gma18g00118 299 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 115 176 IPR000387 GO:0016311|GO:0016791
Gma18g00118 299 MobiDBLite consensus disorder prediction 274 299 - -
Gma18g00118 299 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 232 270 - -
Gma18g00118 299 Gene3D Protein tyrosine phosphatase superfamily 36 198 IPR029021 -
Gma18g00118 299 PANTHER MKPA PROTEIN 5 231 - -
Gma18g00118 299 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 48 199 IPR029021 -
Gma18g00118 299 ProSitePatterns Tyrosine specific protein phosphatases active site. 140 150 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00118 Gma-Chr18 944182 945860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00118 55 198 Protein tyrosine phosphatase (PTP) family AT3G06110 35.417 7.42e-26 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00118 - - gmx:100775448 525.783