Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00108 ATGGCAGCTCTGTTACCTTGCGCGCCGAACGTAGTCTCTGCTCCCTTGGGGAACCGGAGCACGTGCCACTTCCCGCACCGACCTTACTCCCACGCTTTCTCCGGTTCGACCGCCAGACACTTTCTTCGCGGTTCGCTTACCGTCGCCCGCTTCGGGTTCCAACCCGGTTTCTTGCCCGAGCCGGACGAAGCTGAAGGTGTTCTCAGAGAACTGTTTGGCCGAGCGGAGGGACTTCTTTACACGATTGCCGATGCCGCCGTTTCTTCTTCCGATACTGTTGCGGCTTCCACCACCGCCAAACAGAGCAACGACTGGCTTTCCGGAATTGCCAATTACATGGAGACCGTTCTCAAGGTACTCAAGGATGGGCTTTCTGCTTTGCATGTCCCGTATGCTTATGGTTTTGCAATTATACTGCTCACAGTTCTTGTTAAAGCTGCCACTTTTCCATTAACCAAAAAACAGGTAGAATCTGCCTTAGCTATGCGAACTTTGCAACCTCAAGTAAAGGCTATTCAGCAGCAATATGCTGGCGATCAGGAGAGAATTCAACTTGAAACTGCTCGGTTGTATAAACTAGCCAACATTAATCCTCTAGCAGGATGCCTCCCTACACTTGCAACAATACCAGTGTGGATTGGGCTATATCGAGCCCTTTCAAACGTGGCAGATGAGGGGCTCCTTACTGAAGGTTTCTTCTGGATACCTTCTCTTGCTGGTCCAACTACAGTTGCAGCTCGTCAGAATGGAAGTGGTATCTCTTGGATTTTTCCTTTTGTGGATGGTCACCCTCCCCTTGGATGGTCAGATACATTGGCTTACCTGGTCTTGCCTGTGTTGCTGATTGTCTCTCAGTACATCTCTGTCCAAATAATGCAGTCATCACAGCCAAATGATCCCAACATGAAAAGTTCTCAAGCCTTGACCAAGGTCCTTCCATTAATGATTGGTTACTTTGCTCTCTCAGTTCCTTCTGGTCTTAGTCTTTACTGGTTAACAAATAATATATTGAGCACTGCACAACAAGTATGGCTTCAAAAGTTAGGAGGCGCTAAAAATCCTGTAAGGCAAGTCCCAGATGATATCATGAAGAATGACCTAACACAGGTTCAGAAGTCAATATCTAAGCTAAATTCCACAAAAGCGGAAGAAGCCAGACAAAGTGAGAAAACATCAGAGGGGCCACAACCTGGTGAAAGATTTAAGCTAATAAAGGAGCAAGAGGCAAGAAGAAGACAACGAAAAGAAGAAGAAAGGAAAGCCTTGGAAGCAGCGGCTAGAAAAGCTAAAATAGACGAGACATTTGAGAAAACAGTTGAAGAGGGAAATCAAACTGGAGGTGATCTAGTTGTTGAAAAATCTCGGTTTGTGGCTTCAGATACTGATCCCTCCATATCTGGAGTAGTAAATGGTAATCCATTAAGTAAAGACTTGGAGGGAAATCAGAATTCTACGTCTATATCTGAGACAGAAAATAATGATGGTTCTGCTCATTTCAACAATGTTGAGATAAACGAGAAAAATTTAGACAAGGTATTATTGCACATATGA 1551 0.4526 MAALLPCAPNVVSAPLGNRSTCHFPHRPYSHAFSGSTARHFLRGSLTVARFGFQPGFLPEPDEAEGVLRELFGRAEGLLYTIADAAVSSSDTVAASTTAKQSNDWLSGIANYMETVLKVLKDGLSALHVPYAYGFAIILLTVLVKAATFPLTKKQVESALAMRTLQPQVKAIQQQYAGDQERIQLETARLYKLANINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTVAARQNGSGISWIFPFVDGHPPLGWSDTLAYLVLPVLLIVSQYISVQIMQSSQPNDPNMKSSQALTKVLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVRQVPDDIMKNDLTQVQKSISKLNSTKAEEARQSEKTSEGPQPGERFKLIKEQEARRRQRKEEERKALEAAARKAKIDETFEKTVEEGNQTGGDLVVEKSRFVASDTDPSISGVVNGNPLSKDLEGNQNSTSISETENNDGSAHFNNVEINEKNLDKVLLHI 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00108 516 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 133 347 IPR028055 -
Gma18g00108 516 MobiDBLite consensus disorder prediction 382 421 - -
Gma18g00108 516 MobiDBLite consensus disorder prediction 461 499 - -
Gma18g00108 516 Pfam 60Kd inner membrane protein 133 347 IPR001708 GO:0016021|GO:0032977
Gma18g00108 516 PANTHER BNAA09G28180D PROTEIN 26 468 - -
Gma18g00108 516 PANTHER OXA1 26 468 IPR001708 GO:0016021|GO:0032977
Gma18g00108 516 Coils Coil 405 432 - -
Gma18g00108 516 MobiDBLite consensus disorder prediction 377 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00108 Gma-Chr18 851713 856018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00108 71 415 Chloroplast and Mitochondria Gene Families AT2G28800 56.609 4.45e-130 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00108 K03217 - gmx:100802546 960.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00108 18 851713 856018 Gma18g00108 18 851713 856018 ECH
Gma18g00108 18 851713 856018 Gma11g02469 11 39976767 39982902 GST