Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00104 ATGGAGACTTGTACCGTGAAAGGAGGCTGCCCCAGTGACTACATAGCTATTGCCCTATCCATTCTTTCCTTCACTGTGCTTCTCTTATGGTCCATATTTCCCTTCCTAGTTCACAAGGTTCCTCGTACCAAAGGCAGTGGCTTCTGGTTACCTGTTATTCAAGTTGTTGCCAGCTTCAATCTTCTTCTATCGATTGTGATGTCAAATAATTTCTTGAAAATGGGAAAGAGACATTGGTTGCGGTCATGCTACCTATGGGGAGTCTGGGTTGAAGGTCCACTAGGGTTTGGTTTGCTGTTGAGCTGTCGCATAACACAAGCTTCACAATTATATTTTATCTTCGTCAAGAGGCGTTTACCATTGATAAGATCATATATTTTTCTTCCACTTATTCTACTTCCCTGGATTGCTGCTGGTGGTGTTATCCATTCAATGAAGCCTCTAAGCAGTCGCTGTCACATGAAAGCTCAATGGACCATCCCAGTTGTATCCCTCCATTCATTGTATATTGCCATTTTGGTTGGGGTTACAGCTGCTGTTCATCACATAGAGTTCAGGTTTGATGAACTCAAAGACCTCTGGCGGGGAATACTTGTATCAGCTGTGTCCATTGCTGTGTGGGTTACTGCTTACATACTAAATGAAATTTATGACAATATCTCATGGCTTGAAGTTGCCTCCAGATTTCTGCTTTTAGTTGTGGCTAGCATACTTGTGGTGGCTTTCTTTTCAATATCAAGTTCACAACCACTTCTCTCACAAATCAGCTTGAGGAGAAGAGAATCCAGAGAATTTCGCACAATGAGTCAGGCTCTGGGCATACCTGATAGTGGGGTATTAGCACAAAGTGAACCAATTTCAAGGATAGATCCTAATGAACCGTTGGATAAGCTTCTCCTGAATAAGAGATTCCGGCTGTCTTTTATGGCATTTGCTGATAGCTGCTTGGCTGGGGAGAGTGTGCACTTCTTTGATGAAGTATATGAGCTTAGTAAAATACCTGAAGATGACTGTGTGAGAAGGATCTATATGGCACGACATATTATTGAGAAATACATAATTGCAGGTGTGGCTATGGAGGTGAACATCTCTCATAGAAGCAGACAAGAAATTTTATCAACTTCCAGCCTCACACGCCCTGATCTCTTCCATAATGCACTTAATGAAATCATTCAGCTGATGAAAACAAATCTAGCTCGAGATTACTGGTCTTCAATGTTCTTCCTGAAGTTCCAGGAAGACACCAATGTAAGATCTAATGAGTACGAGCTGGAGCAAATGACCGGGTGGAACTTTTCTCCAAGCACTTATGCGCAGAATTTCTCTGGTTTGagaaaagatcctagcattcgaggcctaggcacctacagaagaaagcggattttggcactgcatgccttggaggaaatcaaatacaaggagcaaagggaacgattcctaacagaaagggaatatttggccgacaattatcctgcatgggccactactctgctgccaTCTCTTATAAAGTTAGAAAATTTCTTGGAGTTTGTTAGAATGAAAATGGAGGGGCTTGATTTGTTCCTAGTAGCAACGAATACCATAGGCTTCATTTGTGTGTGCAGTGCCCTTATCAAATTTCTCAAGTGGGTATGGGTGGTGTTCTTGAGGCCACCAAAGAATCTCAAAGAGTATGGTTCATGGGCCATAATCACTGGCTCCACTGATGGAATTGGCAAGGCCATGGCTTTTGAATTGGCATCTAAGGGACTTAACCTTCTCTTGGTTGGTAGAAACCCTCTAAAACTTGAGGCAACATCCAAGGAAATAAGAGATAGACTTGATGTTGAGGTTAAGTTTGTGGTCATAGACATGCAAAAAGTTGAGGGAGTTGAAATAGTAAAAAAAGTAGAGGAAGCAATAGATGGATTGGATATAGGTTTGCTAGTTAATGGTGCAGGCTTGGCTTACCCTTATGCTAGATTCTTTCATGAGGTTGATTTGGAGCTTATGGATGCTATTATAAAAGTAAACTTGGAGGGAGCAACTTGGATCACAAAGGCAGTGCTTCCCACTATGATCAAGAAGAAAAAGGGAGCAATAGTGAACATTGGCTCTGGTTCCACTGTTGTGCTTCCTTCATATCCTCTAGTCACCCTCTATGCTGCTACAAAAGCATACCTTGCAATGTTCTCGAGATGCATCAGTTTGGAATACAAGCATCAAGGAATTGACATCCAATGTCAGGTTCCATTATTTGTATCAACAAAGATGACCAAAATGAAGACATCAATTTTTGTTCCAACGCCGGCTATGTATAGTAAAACATGCACAAGATGGATTGGATACGAAAAACTGGTTGAGCCATACTTCCTCCATTCTGTGCAGGGGTTTCTCATAAGGGCAATTCCTGATTCATTAGTGGATTCCTATATGCTGCGCTATTTTCTTTATTGGCGTGGAAGAGGACTCTCCAAGGACTCCAACATTAAAACATCAGCAGCATCTAATTCTGAAGAAGCAAACATCATTAATCAAGATCATACAAATTAA 2532 0.3855 METCTVKGGCPSDYIAIALSILSFTVLLLWSIFPFLVHKVPRTKGSGFWLPVIQVVASFNLLLSIVMSNNFLKMGKRHWLRSCYLWGVWVEGPLGFGLLLSCRITQASQLYFIFVKRRLPLIRSYIFLPLILLPWIAAGGVIHSMKPLSSRCHMKAQWTIPVVSLHSLYIAILVGVTAAVHHIEFRFDELKDLWRGILVSAVSIAVWVTAYILNEIYDNISWLEVASRFLLLVVASILVVAFFSISSSQPLLSQISLRRRESREFRTMSQALGIPDSGVLAQSEPISRIDPNEPLDKLLLNKRFRLSFMAFADSCLAGESVHFFDEVYELSKIPEDDCVRRIYMARHIIEKYIIAGVAMEVNISHRSRQEILSTSSLTRPDLFHNALNEIIQLMKTNLARDYWSSMFFLKFQEDTNVRSNEYELEQMTGWNFSPSTYAQNFSGLRKDPSIRGLGTYRRKRILALHALEEIKYKEQRERFLTEREYLADNYPAWATTLLPSLIKLENFLEFVRMKMEGLDLFLVATNTIGFICVCSALIKFLKWVWVVFLRPPKNLKEYGSWAIITGSTDGIGKAMAFELASKGLNLLLVGRNPLKLEATSKEIRDRLDVEVKFVVIDMQKVEGVEIVKKVEEAIDGLDIGLLVNGAGLAYPYARFFHEVDLELMDAIIKVNLEGATWITKAVLPTMIKKKKGAIVNIGSGSTVVLPSYPLVTLYAATKAYLAMFSRCISLEYKHQGIDIQCQVPLFVSTKMTKMKTSIFVPTPAMYSKTCTRWIGYEKLVEPYFLHSVQGFLIRAIPDSLVDSYMLRYFLYWRGRGLSKDSNIKTSAASNSEEANIINQDHTN 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00104 843 SMART RGS_3 294 412 IPR016137 -
Gma18g00104 843 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 637 648 IPR002347 -
Gma18g00104 843 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 692 700 IPR002347 -
Gma18g00104 843 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 714 733 IPR002347 -
Gma18g00104 843 Pfam short chain dehydrogenase 561 755 IPR002347 -
Gma18g00104 843 SUPERFAMILY Regulator of G-protein signaling, RGS 271 413 IPR036305 -
Gma18g00104 843 PRINTS Glucose/ribitol dehydrogenase family signature 561 578 IPR002347 -
Gma18g00104 843 PRINTS Glucose/ribitol dehydrogenase family signature 686 702 IPR002347 -
Gma18g00104 843 PRINTS Glucose/ribitol dehydrogenase family signature 637 648 IPR002347 -
Gma18g00104 843 PRINTS Glucose/ribitol dehydrogenase family signature 735 752 IPR002347 -
Gma18g00104 843 PRINTS Glucose/ribitol dehydrogenase family signature 714 733 IPR002347 -
Gma18g00104 843 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 701 729 IPR020904 GO:0016491
Gma18g00104 843 ProSiteProfiles RGS domain profile. 294 412 IPR016137 -
Gma18g00104 843 PANTHER RH59310P 518 822 - -
Gma18g00104 843 CDD 17beta-HSD1_like_SDR_c 559 797 - -
Gma18g00104 843 Pfam Regulator of G protein signaling domain 295 411 IPR016137 -
Gma18g00104 843 PANTHER ENOYL-(ACYL CARRIER) REDUCTASE 518 822 - -
Gma18g00104 843 Gene3D - 290 423 IPR044926 -
Gma18g00104 843 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 558 812 IPR036291 -
Gma18g00104 843 Gene3D - 555 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00104 Gma-Chr18 822282 837170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00104 528 821 Lipid Metabolism Gene Families AT1G67730 49.324 5.02e-101 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00104 - - gmx:100801487 846.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00104 18 822282 837170 Gma18g00104 18 822282 837170 ECH
Gma18g00104 18 822282 837170 Gma11g02473 11 39998116 39999679 GST
Gma05g01674 05 38466294 38469814 Gma18g00104 18 822282 837170 PCT
Gma08g01162 08 9890234 9893826 Gma18g00104 18 822282 837170 PCT