Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00099 ATGGATAATGGTTGTTTCTCTTCCCCAAAGCGTGATTTTCCTGCTGGTCTGAGAGTTCTGGTTGTGGATGATGATCCTACGTGGCTCAAGATCCTTGAGAAGATGCTAAAGAAGTGCAATTATGAAGTGACTACATGTTGTTTAGCAAGGCATGCTCTAAGCTTGCTTCGTGAACGGAAGGATGGATATGATATAGTGATCAGCGATGTAAACATGCCTGACATGGATGGTTTTAAACTTCTTGAGCATGTTGGGCTTGAGATGGATCTTCCTGTCATTATGATGTCTGTGGATGGGGAAACAAGCAAGGTGATGAAAGGTGTTCAACATGGAGCCTGTGATTATCTCCTTAAGCCTATAAGGATGAAAGAACTGAGAAACATATGGCAGCATGTCTTTAGAAAAAAGATACATGAGGCAAAAGAATTTGAAAGTTTTGAGAGCATTCACTTGATGAGAAATGGATCAGAGCTATCAGATGATGGGAACCTGTTTGCTGTAGAAGATGTTACCTCATCAAAGAAAAGAAAAGATGCAGATAGCAAACACGATGACAAAGAATGTTTGGATCCATCATCCACCAAGAAAGCTAGAGTAGTCTGGTCTGTAGATCTTCATCAGAAGTTTGTTAAAGCAGTGAATCAGATTGGATTTGATAAAGTGGGGCCCAAGAAAATACTAGATCTGATGAATGTCCCATGGCTGACTAGAGAGAATGTTGCTAGCCACTTGCAGAAATACAGGCTTTATTTGAGTAGGATTCAGAAAGAAAACGATCAGAGATCTTCCTCAAGTGGAATGAAGCATTCAGATTTTCCTTCAAAAGATATGGGAAGTTTTGGTTTTCAGAACTCAGTAATCAAGCAACAAAATGATGTTGCAATTGACAACTACAATCATTCAGATGGATCATTACAACTTCAGAATGTGGAAACTAAAAGTCATGAAGCTGATCCCAAGGGAATTGTTTCACAGTCCACCATAGCAAAAAAAGGAAGGATTTTGACTGGTAACATTGCTGACACGAACATGAGAGAGAGTTTAAGGGTTGGCCTTAATCAAACTTTTCCCCCTCTAGAGTCAGAAGGAAACCATGCAGTGTTTGATTGTTCCATGCCAACACCATACTCTTGGACTGAAGTTCCACACATGCAACTCAAAGAAGAACACAAGTCACTTGTTTATTTAGAAGATAGCTTCAATCAGTTGCCATTACATGGTAAGCAGCAGCAACACATCCATGTGGATCAATCACAATCAGTTGCTTCAATTAGTTCCGCTCCCTCAATAACCGAGGAAGAGGCTGCTGCTTGTATAGAACCAAAACCTTTGTTTGCAGATTACAACAATGATTATGCCAGTTCTGTGAGTTCAATAGGGAATGCAGTTGCCACCTTTCCTATTCAACCAGGAAGTCTTATTATGAATGGTCAATCTTCAGAACGCATTTCCACTACAACTTCTGGATTGAAAACACAGGAATATAATAATCTCAGTAGCATTTCTGATCAGGAAATTTACCAAAGAAACCTTTTGGGATGTGAGGCAGCTTCTGCATCATTGGACGAGGACTTGCATTTCTATTGGCTAGAAGGCGAATGCTATAATAATATGAACTTTGGTCTGCAGAATATAGGAATGTCTGAATATTATGATCCAGGACTTATTTCAGAAGCTCCAATCCACTTATATGATTCAGCTGATTACTCAGTTATGGATCAAGGTCTATTCATAGCATGA 1740 0.3954 MDNGCFSSPKRDFPAGLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSKVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEAKEFESFESIHLMRNGSELSDDGNLFAVEDVTSSKKRKDADSKHDDKECLDPSSTKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLSRIQKENDQRSSSSGMKHSDFPSKDMGSFGFQNSVIKQQNDVAIDNYNHSDGSLQLQNVETKSHEADPKGIVSQSTIAKKGRILTGNIADTNMRESLRVGLNQTFPPLESEGNHAVFDCSMPTPYSWTEVPHMQLKEEHKSLVYLEDSFNQLPLHGKQQQHIHVDQSQSVASISSAPSITEEEAAACIEPKPLFADYNNDYASSVSSIGNAVATFPIQPGSLIMNGQSSERISTTTSGLKTQEYNNLSSISDQEIYQRNLLGCEAASASLDEDLHFYWLEGECYNNMNFGLQNIGMSEYYDPGLISEAPIHLYDSADYSVMDQGLFIA 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00099 579 CDD REC_typeB_ARR-like 19 133 - -
Gma18g00099 579 SMART REC_2 17 129 IPR001789 GO:0000160
Gma18g00099 579 SUPERFAMILY CheY-like 16 150 IPR011006 -
Gma18g00099 579 Pfam Myb-like DNA-binding domain 198 248 IPR001005 -
Gma18g00099 579 ProSiteProfiles Response regulatory domain profile. 18 133 IPR001789 GO:0000160
Gma18g00099 579 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 196 249 IPR006447 GO:0003677
Gma18g00099 579 Gene3D - 17 189 - -
Gma18g00099 579 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 553 IPR045279 GO:0009736
Gma18g00099 579 Pfam Response regulator receiver domain 19 128 IPR001789 GO:0000160
Gma18g00099 579 SUPERFAMILY Homeodomain-like 194 253 IPR009057 -
Gma18g00099 579 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 553 - -
Gma18g00099 579 Gene3D - 192 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00099 Gma-Chr18 777617 781581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00099 13 262 Response Regulator Gene Family AT2G25180 55.556 1.70e-82 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Gma18g00099 Response_reg 1.7e-24 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00099 - K14491 gmx:100799877 1163.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00099 18 777617 781581 Gma18g00099 18 777617 781581 ECH
Gma18g00099 18 777617 781581 Gma11g02479 11 40051924 40055959 GST
Gma18g00099 18 777617 781581 Gma05g01454 05 36378344 36383105 PCT
Gma18g00099 18 777617 781581 Gma08g00937 08 7901978 7906260 PCT
Gma05g01454 05 36378344 36383105 Gma18g00099 18 777617 781581 PCT
Gma08g00937 08 7901978 7906260 Gma18g00099 18 777617 781581 PCT