Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00093 ATGTATTTATCGGAGAAGCCTCGCCCCATCGATTTCTACAAGGAGGAAGGCGCGCGTGACATGATGATCGAGGTCGTCTCCAACGGCGACCTCCCTCCTCCGCCTCCTCCGCCGCCTCCGCCGATGATCCTCGGCGAGAGCAGCGGCGAGGACCCCGAGGTCGAGATAAAGGCCCCGAAGAAGCGCGCCGAAACCTGGGTTCAGGACGAGACGCGCTCCCTCATTGGCCTTCGCCGCGAGATGGACTCGCTCTTCAACACCTCCAAGTCCAACAAGCACCTGTGGGAGCAGATATCGGCGAAGATGAGGGAGAAGGGTTTCGACCGTTCTCCCACCATGTGCACCGATAAGTGGCGCAATCTCTTGAAGGAGTTCAAGAAGGCCAAGCACCAGGACCGAGGGAGTGGCTCCGCGAAGATGTCGTATTACAAGGAGATTGACGAGATCCTCAGAGAGAGGAGCAAGAATGTGCAGTATAAGAGCCCTACTCCTCCGCCCAAGGTTGATTCCTTTATGCAGTTTGCTGATAAAGGTATTGATGATACCAGCATCTCTTTTGGGCCTGTTGAAGCTACTGGAAGACCAACACTCAATCTTGAGAGAAGTTTGGATCATGATGGACATCCTCTTGCCATTACCACAGCTGATGCTGTTGCAGCAAGTGGAGTCCCTCCTTGGAATTGGAGAGAGACTCCTGGAAATGGTGGAGAAAGTCAGTCATGTTGTGGAAGGGTTATATCGGTTAAATGGGGTGATTATACAAGGCGAATAGGTATTGATGGCACCCCAGAAGCCATTAAAGAAGCAATTAGGGCTGCTTTTAGGTTGAGAACTAAACGTACATTTTGGTTGGAGGATGAAGATCAGATTATCAGAAGTATCGACCGTGAAATGCCTTTAGGAAATTACACTCTTCACATTGATGAAGGAATGGCCATTAAATTACCCCTCTATGATGAGCCTGACCATATACCTGTGCATACTGAAGATAAGATATTTTACACTGAAGACGATTTCCGTGATTTTCTGACCCGCCGGGGTTGGATATGTTTAAGAGAATTTGACAGCTATAGAAATATTGACAATATGGATGATCTTCGACCCGGTGCCATATATCGTGGTGTGAGTTGA 1131 0.4934 MYLSEKPRPIDFYKEEGARDMMIEVVSNGDLPPPPPPPPPPMILGESSGEDPEVEIKAPKKRAETWVQDETRSLIGLRREMDSLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGSGSAKMSYYKEIDEILRERSKNVQYKSPTPPPKVDSFMQFADKGIDDTSISFGPVEATGRPTLNLERSLDHDGHPLAITTADAVAASGVPPWNWRETPGNGGESQSCCGRVISVKWGDYTRRIGIDGTPEAIKEAIRAAFRLRTKRTFWLEDEDQIIRSIDREMPLGNYTLHIDEGMAIKLPLYDEPDHIPVHTEDKIFYTEDDFRDFLTRRGWICLREFDSYRNIDNMDDLRPGAIYRGVS 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00093 376 CDD GT1 64 129 - -
Gma18g00093 376 Pfam Myb/SANT-like DNA-binding domain 65 149 IPR044822 -
Gma18g00093 376 PANTHER - 5 375 - -
Gma18g00093 376 SUPERFAMILY Formin homology 2 domain (FH2 domain) 32 41 - -
Gma18g00093 376 ProSiteProfiles Myb-like domain profile. 58 122 IPR001005 -
Gma18g00093 376 Gene3D - 66 128 - -
Gma18g00093 376 SMART sant 62 124 IPR001005 -
Gma18g00093 376 MobiDBLite consensus disorder prediction 29 45 - -
Gma18g00093 376 MobiDBLite consensus disorder prediction 26 62 - -
Gma18g00093 376 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-4 5 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00093 Gma-Chr18 730311 734604 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00093 20 375 Trihelix Transcription Factor Family AT3G25990 70.219 0.0 507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gma18g00093 Myb_DNA-bind_4 2.8e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00093 - - gmx:100137074 763.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00093 18 730311 734604 Gma18g00093 18 730311 734604 ECH
Gma18g00093 18 730311 734604 Gma11g02487 11 40106512 40112528 GST