Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00087 ATGGAAGAGCAAATCAAGTCCGAATTCAAAAGAAGTGGTTTCGGCCTCGAAGACGAACAAGAAATTCTCAGCAAATGTGTCACTTACTGCATCAACTACAGTCTCACTCCTTCCGATCTCGTCTCAAGCTGGGAAGTTTATTACCTCAATAGACAGCTGAACGAACCAATAGTACAAAATACTGAAATTGATGGCTTTCTGTTGCATCTACAAAATGAGAAGAAAGAGACTGTTATAAAGGAAAAGGAGGAAGCTGGCTTGCATATTTACTCTATCGGAGATGTAGAAATGATCTTAAATAATGATGATGATACAAAGGATAATACTCCCGGAACTCCAATAAATCATCATCAAGATCCTTTATCTCCTGCACTTGATACAACATCTTTAATGTATGAGAATGTTTTATCTTCTGGAAAACCATCAAAATCAAAACTAATAACACCCTTTTCAAAGAGAACAGATAAGTTTGTGGTGAAATTTAGCATCAACACTGTCCCTAAAGTAGAGAAGGCTGAAAATGATGAAGATGATGTTCTTACAAGAGTTCCACTCCATGAAAGGTGTTCATTATCCATTCACAGATCAGGACCCAAACCAGGTTGCAGATTTTTGTATGATAGAACAGAGGATAGGCTTAATGCAATAGAAAACCGACTTAGGAAATATACAAGGGCATTTGTAGCTTCTGGGCTCTATGAAGAACCAACAGACCCTACAACTGCTTCACAGAGAAGCATTTTTGCTGTTGGCATGATTTGTTGTGATGGAGAAGGCCGTTTAAATGAGAAGTCTGTCATGCTGCAGAGCAGTATTGAGCATTCTGGAGGAGAATGTGTTCGCCTAGATTTGCAACGTTTAAGCCATTATTCAATTTTTCCTGGCCAGATAGTTGGTATTGGAGGGCATAATCCCAGTGGGCATTGCTTCGTTGCATCTAAATTGGTGGATTCTATACCTACCTACATTGCCAATGAGGATTCAAATCCTGCAAAGAAGCAAGCTGTTGATAAGGAGAATCAGCCAACTGATCTGCTTTGTAAAGAAAGAGAATTATCAATGATTATTGCAGCTGGCCCCTTTACTACAACAGACAATTTGTTGTTTGAGCCTCTTATAGCACTGCTGACACATGCAAAACTAAGACCACCACAGTTGCTTGTATTGCTGGGACCATTTGTTGATTCTGAGCACCCAGACATTAAGAAAGGAACTGTAGACAGGAGTTTTGATGAAATATTTGAGGAAATCCTGAAGAAGTTGGAAGAATATGTAGATTCAGCTACGCGTGTTGTTCTTGTTCCGTCTATACGTGATGCTAACCATGATTTTGTTTTTCCTCAGCCTGCATTGGACATGAAATCTCAGATAGTCAGTCTCAGTAATCCTGGAATCTTTGAGGCAAATAAGGTTAAGGTTGGTTGCTGCACCGTGGATATTCTGAAGCAAATCAGTGGGGAGGAGATATCACGAACTGCAGCAGATGGAAAACCCATTGATCGCTTGAGTAGACTAGCAAACCATATTCTTAACCAACAAAGCTTCTATCCACTTTACCCACCAGCAGAAGGTGTTCCCTTGGACTTTTCGCTTGCTCCAGAAGCCCTTCAACTGTCGTCGATTCCAGACATACTTATACTACCTTCAGACATCAAGTACTTTGTCAAGGTGCTTAGTAGCGAAAATGAAGGGATTAACCACACGAAATGCATAGCCGTCAATCCGGGAAGACTAGCCAAGGGAGAAGGAGGGGGAACTTTTGTTGAGCTTGATTATTGTGGGGGTTCCGACCAAATTAACGCTTCAGTTGTTGGCATATGA 1821 0.4069 MEEQIKSEFKRSGFGLEDEQEILSKCVTYCINYSLTPSDLVSSWEVYYLNRQLNEPIVQNTEIDGFLLHLQNEKKETVIKEKEEAGLHIYSIGDVEMILNNDDDTKDNTPGTPINHHQDPLSPALDTTSLMYENVLSSGKPSKSKLITPFSKRTDKFVVKFSINTVPKVEKAENDEDDVLTRVPLHERCSLSIHRSGPKPGCRFLYDRTEDRLNAIENRLRKYTRAFVASGLYEEPTDPTTASQRSIFAVGMICCDGEGRLNEKSVMLQSSIEHSGGECVRLDLQRLSHYSIFPGQIVGIGGHNPSGHCFVASKLVDSIPTYIANEDSNPAKKQAVDKENQPTDLLCKERELSMIIAAGPFTTTDNLLFEPLIALLTHAKLRPPQLLVLLGPFVDSEHPDIKKGTVDRSFDEIFEEILKKLEEYVDSATRVVLVPSIRDANHDFVFPQPALDMKSQIVSLSNPGIFEANKVKVGCCTVDILKQISGEEISRTAADGKPIDRLSRLANHILNQQSFYPLYPPAEGVPLDFSLAPEALQLSSIPDILILPSDIKYFVKVLSSENEGINHTKCIAVNPGRLAKGEGGGTFVELDYCGGSDQINASVVGI 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00087 606 Pfam DNA polymerase alpha/epsilon subunit B 355 556 IPR007185 GO:0003677|GO:0006260
Gma18g00087 606 Coils Coil 206 226 - -
Gma18g00087 606 PIRSF DNA_pol_alpha_2 1 593 IPR016722 -
Gma18g00087 606 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 1 604 IPR016722 -
Gma18g00087 606 Gene3D - 1 66 IPR043034 -
Gma18g00087 606 Gene3D - 333 491 - -
Gma18g00087 606 Gene3D - 497 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00087 Gma-Chr18 690207 695859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g00087 2 606 Core DNA Replication Machinery Family AT1G67630 58.360 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00087 K02321 - gmx:100797769 1200.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00087 18 690207 695859 Gma11g02493 11 40144408 40149830 GST